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NECEvent2014_8_4_scaffold_13_2

Organism: NECEvent2014_8_4_Clostridium_paraputrificum_31_73

near complete RP 50 / 55 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: 1996..3768

Top 3 Functional Annotations

Value Algorithm Source
lipid A export ATP-binding/permease protein MsbA (EC:3.6.3.-) similarity KEGG
DB: KEGG
  • Identity: 76.6
  • Coverage: 590.0
  • Bit_score: 899
  • Evalue 6.30e-259
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H825_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 76.4
  • Coverage: 590.0
  • Bit_score: 903
  • Evalue 9.10e-260
  • rbh
ABC transporter {ECO:0000313|EMBL:KEZ87303.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.5
  • Coverage: 590.0
  • Bit_score: 915
  • Evalue 3.20e-263

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Taxonomy

Clostridium sulfidigenes → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1773
ATGAATAAGTTTAAAGTTATAGTTAAAAAAATTTCTCCTTTTATAAAACCTTATAGATGGGCATTTTTTGGAGCCATAATTTTTATAATTTCAGCTGCAATATTTAATGCATTAGCTCCAGTAACTGAAGGATTAATAATCACTCAATTAACTGAGGATTCTTTCAATATAATGAAAGGAATTGAGGGAGCTGGAGTTGACTTTGGATACGTAATAAAGGTAATGATAGTTTTAGGGGGCGTTTATGTTTCAAGTACTGCTTCAACTTATATTGCAAGTTTTCTTTTAACTAATGCAATTCAAAATACAGTAAAAGGACTTAGAAATGCTGTGCAAGATAAGATAAGAAGGTTGCCAATAAGCTATTTTGATGGGAATAGTTATGGAGATGTATTAAGCAGAATAACTAATGACATAGACACAATATCTAATGCCCTTCAACAAAGTTTTGTGCAAGTTGTTAATTCATTTTTATCAATTACCCTTGCACTTATAATGATGTTTACTATAAATATAAAAATGGCATTTATAGCTGTTTTTATAATTCCGTTAAGTATATTAGTATCAAGATTTATTGTAAGTAAATCACAAAATCTATTTTATAGACAGCAGAAGGCACTGGGAAAATTAAATGGTAAAGTACAAGAAATGTATACTGGTTTTAATGAAATAAAGCTTTATGGAAAGCAAGAAGATTCTATAAAAGAGTTTATGGAAACCAATGATGAACTTTGTAGAACTGGATTTAAAGCACAGTTTATATCAAGCACAATGTCTCCACTTGTTTCATTAGTTAGTTATATTGGAATTGCTATAATAGGAGCAATAGGAGCTATAGATGCAATTAGAGGAATAATTACTACAGGAAACTTACAAGCTTTCATAAGATATATATGGCAAATAAACCAACCTTTATCGCAAGTAACTCAATTATCTTCTGCTATGCAATCAGCTGTAGCAGCTATGGAAAGAGTAATAGAAATCTTAGATGAGGAAGAACAAATAAAAGATAAAGTAGATTCAATAACACTAAAGGATCCAAAGGGAAATGTAACCTTTGATCATGTTAAATTTGGCTACTTTGAAGATAAAACTCTTATTAAAGATTTGAATGTAGATATAAAAAGTGGTCAGATGGTTGCAATAGTTGGACCAACTGGTGCAGGAAAAACAACAATTATCAATCTACTAATGAGATTTTATGAGATTCAAGGAGGAGCTATTAAAATTGATGGCGTAGATATTAGAGATATAAAGCGTGAAGAGCTAAGAAAGATGTTTGGAATGGTACTCCAAGATACATGGCTTTATAAAGGCACAATAAAAGATAATATTAGATATGGAAGATTTGATGCAAGTGATGAAGAAGTTATAAATGCAGCAAAAGTTGCAAATGTACATCATTTTATTAAAACCCTACCAGATGGATATGATATGATTCTGAATGAAGAAGCTTCAAACATATCTCAGGGTGAGAAACAATTACTTACTATTGCTAGAGCAATATTAGCTGACCCTGCCATTTTAATACTTGATGAAGCTACTAGTTCAGTAGATACAAGATTAGAACTTATGATTCAAAATGCAATGAAAAACGTAATGAGCGGTAGAACAAGTTTTGTAATTGCTCATAGATTATCTACAATAAGAAATGCAGATTTAATATTAGTTATTAATGATGGAGATATTGTTGAAAAAGGTACACATGAAGAGCTAATGAATTATAGAGGATTCTATGAAAAATTATACAATAGTCAGTTTGCAAATAAATAA
PROTEIN sequence
Length: 591
MNKFKVIVKKISPFIKPYRWAFFGAIIFIISAAIFNALAPVTEGLIITQLTEDSFNIMKGIEGAGVDFGYVIKVMIVLGGVYVSSTASTYIASFLLTNAIQNTVKGLRNAVQDKIRRLPISYFDGNSYGDVLSRITNDIDTISNALQQSFVQVVNSFLSITLALIMMFTINIKMAFIAVFIIPLSILVSRFIVSKSQNLFYRQQKALGKLNGKVQEMYTGFNEIKLYGKQEDSIKEFMETNDELCRTGFKAQFISSTMSPLVSLVSYIGIAIIGAIGAIDAIRGIITTGNLQAFIRYIWQINQPLSQVTQLSSAMQSAVAAMERVIEILDEEEQIKDKVDSITLKDPKGNVTFDHVKFGYFEDKTLIKDLNVDIKSGQMVAIVGPTGAGKTTIINLLMRFYEIQGGAIKIDGVDIRDIKREELRKMFGMVLQDTWLYKGTIKDNIRYGRFDASDEEVINAAKVANVHHFIKTLPDGYDMILNEEASNISQGEKQLLTIARAILADPAILILDEATSSVDTRLELMIQNAMKNVMSGRTSFVIAHRLSTIRNADLILVINDGDIVEKGTHEELMNYRGFYEKLYNSQFANK*