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NECEvent2014_8_4_scaffold_20_17

Organism: NECEvent2014_8_4_Clostridium_paraputrificum_31_73

near complete RP 50 / 55 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: comp(18292..19008)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridiu similarity UNIPROT
DB: UniProtKB
  • Identity: 81.5
  • Coverage: 238.0
  • Bit_score: 406
  • Evalue 2.60e-110
rluB1; ribosomal large subunit pseudouridine synthase B (EC:5.4.99.19) similarity KEGG
DB: KEGG
  • Identity: 79.4
  • Coverage: 238.0
  • Bit_score: 399
  • Evalue 4.80e-109
Pseudouridine synthase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JGR2_CLOBU similarity UNIREF
DB: UNIREF100
  • Identity: 81.9
  • Coverage: 238.0
  • Bit_score: 408
  • Evalue 6.30e-111

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Taxonomy

Clostridium butyricum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 717
GTGGAAAGATTAGATAAAATAATATCAAATTTAGGATATGGGAGTAGAAAAGAAATAAAAGCCTTAGTAAAGAAGGGGTTAGTTAAGGTAGATGGAGAAGTGGTAAAAGATAATGGGGTATTAATTGATCCGGAAAAATCAGTTATAAATATAAATGGAGAAGATTTATTCTATAGAGAGTATATATATTTAATGATGAATAAGCCAGATGGTGTAATATCTGCAACATACGATAATAGAGAAGAAACTGTTATAGATTTATTAGAGGTAGAACATCAAGTATTTAATCCATTTCCAGTAGGAAGATTAGATAAAGATACTGTAGGATTATTATTATTAACAAATGATGGGGAACTAAATCATAGATTAATTTCACCTAAGTGGCATGTTGATAAGGTTTATTATGCGAAAATTGATAAGGCAGTAGATGAAAAAGATGTTGAAGCATTTAAAAATGGAATAACTTTAGATGATGGGTATAAGTGTAAGGAAGGTAAGTTAGAAATAATTAATTCATCAAATGAAGGGGCAGAAGTGATGGTAACTATACAAGAAGGAAAGTATCATCAAGTAAAAAGAATGTTTGAAGCGTTAGGAAAAACTGTTGTGTATTTAAAAAGAACAGAGTTTGGAGGTTTGCCTTTAGACCAAGAATTGGAGGAAGGCGAATATCGTGAACTAACAGAAGATGAATTAGCTCTTTTAAAGAGTTATTAA
PROTEIN sequence
Length: 239
VERLDKIISNLGYGSRKEIKALVKKGLVKVDGEVVKDNGVLIDPEKSVININGEDLFYREYIYLMMNKPDGVISATYDNREETVIDLLEVEHQVFNPFPVGRLDKDTVGLLLLTNDGELNHRLISPKWHVDKVYYAKIDKAVDEKDVEAFKNGITLDDGYKCKEGKLEIINSSNEGAEVMVTIQEGKYHQVKRMFEALGKTVVYLKRTEFGGLPLDQELEEGEYRELTEDELALLKSY*