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NECEvent2014_8_4_scaffold_39_42

Organism: NECEvent2014_8_4_Clostridium_paraputrificum_31_73

near complete RP 50 / 55 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: comp(37653..38846)

Top 3 Functional Annotations

Value Algorithm Source
Transposase Int-Tn n=2 Tax=Clostridium difficile RepID=T3IDM4_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 397.0
  • Bit_score: 801
  • Evalue 3.30e-229
  • rbh
Integrase {ECO:0000313|EMBL:CDF47256.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 397.0
  • Bit_score: 801
  • Evalue 4.60e-229
Site-specific recombinase XerD similarity KEGG
DB: KEGG
  • Identity: 94.2
  • Coverage: 397.0
  • Bit_score: 761
  • Evalue 1.40e-217

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1194
ATGAAAGAAAAAAGACGGGATAACAAAGGTCGTATCCTGCATACTGGAGAGAGCCAACGAACAGACGGAAAATACTTATATAAATATGTAGACGCATTGGGAAACACAAAATATGTGTATGCTTGGAGATTGACACCCACAGACCCGACACCAAAGGGAAAACGGGAAAAACCCTCACTTCGAGAACTGGAACAGCAGATAAGACGGGATATTGAGGACGGTATCGACAGCACAGGCAAGAAAATGACGCTTTGCCAACTCTATGCCAAACAGAACGCACAGAGGACAAATGTGAAGAAAAGCACACAGAAACAACGGGAACAACTCATGCGGTTATTAAAAGAGGACAAGTTAGGTGCTAGGAGCATTGATACGATAAAACCCTCTGACGCTAAAGAATGGGCGTTACGCATGAAAGACAAAGGCTTTTCCTACAATACCATTAACAACCATAAACGCTCGTTAAAAGCGTCATTCTACATAGCCATACAAGATGATTATGTGAGGAAAAACCCTTTTGATTTCAAGCTAAGTGAAGTCATAGAAAATGATACCAAAGAGAAAGTCGCATTGACAGAGGAACAGGAGCAAGCCTTATTGTCATTTATTAAGACGGACAACGTGTATCACAAGCATTATGATGATGTGCTGATACTGTTAAAGACAGGACTTCGTATCTCGGAACTGTGCGGACTGACAGTAGCCGACATTGATTTCAAGAATGAAGTTGTGATTATCGACCACCAGTTACTAAAGAGTAAGGAACAGGGCTATTATATTGAAACGCCTAAGACGAAAAGCGGGATAAGGCAAGTGCCATTAAGCAAAGAAACGATACAGGCATTTCAACGGGTTATCAACAGCCGACCAAAGATAAAGTCGATAGAGGTAGACGGACACAGCGGTTTTGTGTTTATCAATCCGAAAGGTAATCCAAAAGTTGCCATTGATTATAACGCCTTATTTATCCGTATGGTAAAGAAATACAACAAGCACCACAAGGACAATCCCTTGCCACATATTACACCGCATACGCTACGCCATACATTCTGCACAAGGCTGGCAAGCAAGAACATGAACCCGAAAGATTTACAGTATATCATGGGGCATTCAAACATCAGTATCACAATGAACTGGTACGCTCATGCGTCCATAGATACCGCAAAATCAGAGGTTCAGCGTCTAATCGCATAG
PROTEIN sequence
Length: 398
MKEKRRDNKGRILHTGESQRTDGKYLYKYVDALGNTKYVYAWRLTPTDPTPKGKREKPSLRELEQQIRRDIEDGIDSTGKKMTLCQLYAKQNAQRTNVKKSTQKQREQLMRLLKEDKLGARSIDTIKPSDAKEWALRMKDKGFSYNTINNHKRSLKASFYIAIQDDYVRKNPFDFKLSEVIENDTKEKVALTEEQEQALLSFIKTDNVYHKHYDDVLILLKTGLRISELCGLTVADIDFKNEVVIIDHQLLKSKEQGYYIETPKTKSGIRQVPLSKETIQAFQRVINSRPKIKSIEVDGHSGFVFINPKGNPKVAIDYNALFIRMVKKYNKHHKDNPLPHITPHTLRHTFCTRLASKNMNPKDLQYIMGHSNISITMNWYAHASIDTAKSEVQRLIA*