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NECEvent2014_8_4_scaffold_220_25

Organism: NECEvent2014_8_4_Clostridium_paraputrificum_31_73

near complete RP 50 / 55 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: comp(20587..20907)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=2 Tax=Clostridium botulinum B RepID=B2TNP3_CLOBB similarity UNIREF
DB: UNIREF100
  • Identity: 61.3
  • Coverage: 106.0
  • Bit_score: 147
  • Evalue 9.00e-33
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 61.3
  • Coverage: 106.0
  • Bit_score: 147
  • Evalue 2.50e-33
RNA polymerase sigma factor, sigma-70 family protein {ECO:0000313|EMBL:AIY80440.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clost similarity UNIPROT
DB: UniProtKB
  • Identity: 61.3
  • Coverage: 106.0
  • Bit_score: 147
  • Evalue 1.30e-32

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Taxonomy

Clostridium botulinum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 321
AATGAGGTATATAGACATTACGGTATTTTAAAGCTCAGTCAAAATTTTATTCCTGTTTTTTCCTCAGAGAGCGAGGAAGAGTTTCTTAATTTAAAAACAGATTTAAAGGTTGAACACAACTATGATGAAAAGCTACTTTGTGATTCTATATGGAAATATTTAAAGGATAAGGACTCATTAACTCTTAAAATATTTATTTTATATTTTAGCAAGGATTTAAAAATAAAAGATATAGCTAATATATTAAAGGTTAATGAGTCTACTGTAAAAAATAGGCTCTATAGAACTATGAAAGAAATAAATAAGGAATTTAATTTGTAG
PROTEIN sequence
Length: 107
NEVYRHYGILKLSQNFIPVFSSESEEEFLNLKTDLKVEHNYDEKLLCDSIWKYLKDKDSLTLKIFILYFSKDLKIKDIANILKVNESTVKNRLYRTMKEINKEFNL*