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NECEvent2014_8_5_scaffold_525

Alias: 178_005_scaffold_525

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_5_scaffold_525_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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69..248
DNA (180bp) protein (60aa)
UPF0291 protein CPE1003 n=11 Tax=Clostridium perfringens RepID=Y1003_CLOPE
hypothetical protein
UPF0291 protein AC3_1380 {ECO:0000256|HAMAP-Rule:MF_01103}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str.
NECEvent2014_8_5_scaffold_525_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

260..1183
DNA (924bp) protein (308aa)
hprK; HPr kinase/phosphorylase (EC:2.7.1.-)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SA
HPr kinase/phosphorylase n=10 Tax=Clostridium perfringens RepID=HPRK_CLOP1 rbh
NECEvent2014_8_5_scaffold_525_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1228..2157
DNA (930bp) protein (310aa)
Putative cation transporter n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RK05_CLOPF rbh
Putative cation transporter {ECO:0000313|EMBL:EDT25692.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str
cation transporter
NECEvent2014_8_5_scaffold_525_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2224..3630
DNA (1407bp) protein (469aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostrid
M18 family aminopeptidase n=4 Tax=Clostridium perfringens RepID=Q0TRN1_CLOP1 rbh
aminopeptidase 1
NECEvent2014_8_5_scaffold_525_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3755..5278
DNA (1524bp) protein (508aa)
Putative diguanylate cyclase n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RK07_CLOPF rbh
Putative diguanylate cyclase {ECO:0000313|EMBL:EDT25699.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE st
diguanylate cyclase
NECEvent2014_8_5_scaffold_525_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5448..5807
DNA (360bp) protein (120aa)
mgsA; methylglyoxal synthase (EC:4.2.3.3)
Methylglyoxal synthase {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089917}; Short=MGS {ECO:0000256|HAMAP-Rule:MF_00549};; EC=4.2.3.3 {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAA
Methylglyoxal synthase n=3 Tax=Clostridium perfringens RepID=B1R8M8_CLOPF
NECEvent2014_8_5_scaffold_525_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5914..6060
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BU99_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT14693.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
NECEvent2014_8_5_scaffold_525_8
unknown

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6137..6268
DNA (132bp) protein (44aa)

This feature has no annotations

NECEvent2014_8_5_scaffold_525_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6283..7155
DNA (873bp) protein (291aa)
Putative lipoprotein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RK09_CLOPF rbh
Putative lipoprotein {ECO:0000313|EMBL:EDT25702.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969
putative lipoprotein
NECEvent2014_8_5_scaffold_525_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7262..7522
DNA (261bp) protein (87aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=H7CV71_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT25703.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
NECEvent2014_8_5_scaffold_525_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7606..7986
DNA (381bp) protein (127aa)
Probable translation initiation inhibitor n=8 Tax=Clostridium perfringens RepID=Q8XLM9_CLOPE
endoribonuclease L-PSP
Putative endoribonuclease L-PSP {ECO:0000313|EMBL:EDT25715.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE
NECEvent2014_8_5_scaffold_525_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8030..8275
DNA (246bp) protein (82aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CV73_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT70572.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1
NECEvent2014_8_5_scaffold_525_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8383..11019)
DNA (2637bp) protein (879aa)
Rubredoxin/flavodoxin/oxidoreductase n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RK13_CLOPF rbh
Rubredoxin/flavodoxin/oxidoreductase {ECO:0000313|EMBL:EDT25704.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringen
rubredoxin/flavodoxin/oxidoreductase
NECEvent2014_8_5_scaffold_525_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11224..11499)
DNA (276bp) protein (92aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1BU93_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT14712.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
hypothetical protein
NECEvent2014_8_5_scaffold_525_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12333..12923
DNA (591bp) protein (197aa)
Para-aminobenzoate synthase glutamine amidotransferase, component II n=4 Tax=Clostridium perfringens RepID=B1BU92_CLOPF rbh
Para-aminobenzoate synthase glutamine amidotransferase, component II {ECO:0000313|EMBL:EDT70598.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;
pabA; anthranilate synthase component II
NECEvent2014_8_5_scaffold_525_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12920..14275
DNA (1356bp) protein (452aa)
pabB; para-aminobenzoate synthase, component I (EC:4.1.3.-)
Para-aminobenzoate synthase, component I {ECO:0000313|EMBL:EDT23406.1}; EC=4.1.3.- {ECO:0000313|EMBL:EDT23406.1};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae
Para-aminobenzoate synthase, component I n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RRL6_CLOPF rbh
NECEvent2014_8_5_scaffold_525_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14293..15063
DNA (771bp) protein (257aa)
Putative branched-chain amino acid aminotransferase n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R8N6_CLOPF rbh
Putative branched-chain amino acid aminotransferase {ECO:0000313|EMBL:EDT23354.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostri
branched-chain amino acid aminotransferase
NECEvent2014_8_5_scaffold_525_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15078..15635
DNA (558bp) protein (186aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|
folE; GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase 1 n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V6H9_CLOPF rbh
NECEvent2014_8_5_scaffold_525_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15660..16133
DNA (474bp) protein (158aa)
HDIG/HD domain protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0STY8_CLOPS rbh
HDIG/HD domain-containing protein
HDIG/HD domain protein {ECO:0000313|EMBL:ABG87259.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM10
NECEvent2014_8_5_scaffold_525_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16146..16955
DNA (810bp) protein (270aa)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|Rule
folP; dihydropteroate synthase (EC:2.5.1.15)
Dihydropteroate synthase n=3 Tax=Clostridium perfringens RepID=H7CV81_CLOPF rbh
NECEvent2014_8_5_scaffold_525_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16968..17726
DNA (759bp) protein (253aa)
folBK; dihydroneopterin aldolase/2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3 4.1.2.25)
Dihydroneopterin aldolase/ 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine n=1 Tax=Clostridium perfringens F262 RepID=H7CV82_CLOPF rbh
Dihydroneopterin aldolase/ 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine {ECO:0000313|EMBL:EIA17436.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clost
Displaying 21 items

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