ggKbase home page

NECEvent2014_8_5_scaffold_654_3

Organism: NECEvent2014_8_5_Clostridium_perfringens_28_24

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 15 / 38 MC: 1
Location: 3260..4555

Top 3 Functional Annotations

Value Algorithm Source
lysA; diaminopimelate decarboxylase (EC:4.1.1.20) similarity KEGG
DB: KEGG
  • Identity: 99.8
  • Coverage: 431.0
  • Bit_score: 866
  • Evalue 3.30e-249
Diaminopimelate decarboxylase n=5 Tax=Clostridium perfringens RepID=Q0TTL1_CLOP1 similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 431.0
  • Bit_score: 866
  • Evalue 1.20e-248
  • rbh
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120 similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 431.0
  • Bit_score: 866
  • Evalue 1.60e-248

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1296
ATGAAATTATTTGGATCAATGAAAGTAGAAGAAAATGAGTTATATGTTGGAGGAGTAAAAGCAAGTGCTTTAAGCAAGGAATATGGAACTCCTTTATATGTTATTGATGAAGAGTTAGTGAGAAGCAATTGTAGAAGATACTATAATGCTATGAAGTGTGAAGAAAGAGGAAACAGAGTTACCTATGCAGGAAAGGCATTTATAAATATGTCCATGTGCAATTTAGTTAATGAAGAAAATTTATATTTAGATGTTGTTTCAGGTGGAGAGCTTTATACTGCTTATAAAGCAGGTTTCCCATTAGAAAGAATATATTTCCATGGTAACAATAAATCTGATTATGAAATAGATTTAGGAGTAAGATTAGGAATTGGAAGATTTATAGTTGATAATATTCATGAACTAGAAGTTCTTAATTCTATAGCTCAAGAATATGGAAGAGTTCAAAAAGTTTATTTGAGAATAACTCCTGGAGTAGAGGCCCATACCCATGAATATATAAAAACAGGTCAATTGGACTCAAAATTTGGATTCCCTGTAATTGGTGATACAGTTTATGACGCTATTAAAAGAGCAATGGAATTAGAGTATATAGAACTTAATGGATTGCATTGTCATATAGGTTCGCAAATATTTGACTTAGAACCTTTTGAAGATACAACAGAAATTATGCTAAATCTTATAAATGATATAAAAGAAACCTTAGGATATGAAATAAAAGAATTAGACTTAGGTGGAGGATTTGGTATATATTACACTGAAGGAGATAAGCCAAAAGAAATAGAAGAATATTGTTCAGTTATAATAAATAAAGCTGATGAAATATGCAGAAAGTTAAATATGAATGTTCCTATATTAAGTATAGAGCCAGGAAGAAGTATTGTAGGGAATGCAGGATTAACTCTTTATACTGTAGGAGCTATAAAAGAAATTCCTAATATAAGAAAATATGTAAGTGTAGATGGTGGAATGAGTGATAATATAAGACCAGCCTTATACAGTGCAAATTATGAATCATTAATAGCTAACAGAGTTTTTGATAATTCTAAGGAGATAGTTACTGTAGCAGGAAAATGCTGTGAATCAGGGGATGTGCTTTTAAATTCCATAGAAATGCCTAGAATGGAAACTGGAGATATATTAGCTATAATGTCTACAGGAGCATATGGACATTCAATGGCTAATAATTATAATAGAATTCCTAAGGCAGCAGTTGTAAGTGTAAGAAATGGAATTTCAAAAGTTATGTGTAAAAGAGAAACTTATGAAGATTTGCTTAGAAATGAATGTTTTTAA
PROTEIN sequence
Length: 432
MKLFGSMKVEENELYVGGVKASALSKEYGTPLYVIDEELVRSNCRRYYNAMKCEERGNRVTYAGKAFINMSMCNLVNEENLYLDVVSGGELYTAYKAGFPLERIYFHGNNKSDYEIDLGVRLGIGRFIVDNIHELEVLNSIAQEYGRVQKVYLRITPGVEAHTHEYIKTGQLDSKFGFPVIGDTVYDAIKRAMELEYIELNGLHCHIGSQIFDLEPFEDTTEIMLNLINDIKETLGYEIKELDLGGGFGIYYTEGDKPKEIEEYCSVIINKADEICRKLNMNVPILSIEPGRSIVGNAGLTLYTVGAIKEIPNIRKYVSVDGGMSDNIRPALYSANYESLIANRVFDNSKEIVTVAGKCCESGDVLLNSIEMPRMETGDILAIMSTGAYGHSMANNYNRIPKAAVVSVRNGISKVMCKRETYEDLLRNECF*