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NECEvent2014_8_5_scaffold_545_1

Organism: NECEvent2014_8_5_Clostridium_perfringens_28_24

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 15 / 38 MC: 1
Location: 225..1400

Top 3 Functional Annotations

Value Algorithm Source
Triple helix repeat-containing collagen n=2 Tax=Clostridium perfringens RepID=H7CUU3_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 97.8
  • Coverage: 400.0
  • Bit_score: 839
  • Evalue 1.10e-240
  • rbh
Triple helix repeat-containing collagen {ECO:0000313|EMBL:EIA17527.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfrin similarity UNIPROT
DB: UniProtKB
  • Identity: 97.8
  • Coverage: 400.0
  • Bit_score: 839
  • Evalue 1.50e-240
triple helix repeat-containing collagen similarity KEGG
DB: KEGG
  • Identity: 97.5
  • Coverage: 400.0
  • Bit_score: 838
  • Evalue 6.70e-241

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1176
ATGATAAGAAAAATTTATAATCCTAATAGATATTATGATGATTACAATAGATATAATTGTTACGATAGATATAATTGCTATGATGATGAGTATTGTCAAGATGATTATTATTGCAAGGAAGACTGTTATTGTAAAGATGATTGCTATTTAGAGATAAATTGCAATTGTTGCGATTGTTGTAAACCTGGACCAAGGGGTCCAAGAGGACCTCAAGGTCCTAGGGGTCCTCAAGGACCAAGAGGTCCTATGGGATGTCAAGGTGAGCGTGGTCCAATAGGTCCTATGGGCCCTATGGGACCTATTGGACCTCAAGGTCCACAAGGTGAACAAGGTCTTACTGGCCCTCAAGGCCCTGCAGGTCCTCAAGGCGAACAAGGTCCACAAGGTGATCAAGGTCCTGTTGGTCCTATAGGCCCTCAAGGTCCTCAGGGTGAGCAAGGTCTTACTGGTCCTCAAGGTCCTGCTGGTTCTCAAGGTCCTGAAGGTCCTACTGGCCCTCAAGGTGCTACTGGCCCTCAAGGTCCTGAAGGTCCTGTTGGTCCTCAAGGAGCTCAAGGTCCACAAGGCCCTCAAGGTCCTCAAGGTGCTACCGGTCCTACTGGCCCACAGGGTCCTCAAGGTAATCAAGGTCCTGCTGGTCCTCAAGGCCCTGTTGGTCCTCAAGGTCCTCAAGGTGAACCTGGAGTGGATTTTGATGATACCTTATTAGTTAGTTATTCCTCATTAACTTCTCAAAATGTTAATGCTAATGGTATATTCACTTATAATATCCAAAATCCTAATGGCTCAACTTTTACAGCAATAACTGCCAATATAGCAAACGGAACATTTACAATAAATGAACCTGGAAGATATTTATTTATGTGGTCATTTAATTTAGATAACACAAATAATACCACAGCTAGCGCTATAGTATCTTTATTTAGAAATGGTTCTAGAGTATTTTTATCTGGAACTCCTAGAGTAGCTCCTGGTGAAATAGGCGTAGTAAATGGAAGTATTGCCGTAAATGCTAATGCTGGTGATGTATTTGCTTTAGTTAATAATTCTACAAGAAACGTTTTATCACAAATAATATCTTCACCAATTTCTGTAACTCCAGCTATCTTAGGAGAATCTACAGGAATAAATTCAGGAATAGGATCTTGGGTTCAAATAGTTAGAGTATCTGATTAA
PROTEIN sequence
Length: 392
MIRKIYNPNRYYDDYNRYNCYDRYNCYDDEYCQDDYYCKEDCYCKDDCYLEINCNCCDCCKPGPRGPRGPQGPRGPQGPRGPMGCQGERGPIGPMGPMGPIGPQGPQGEQGLTGPQGPAGPQGEQGPQGDQGPVGPIGPQGPQGEQGLTGPQGPAGSQGPEGPTGPQGATGPQGPEGPVGPQGAQGPQGPQGPQGATGPTGPQGPQGNQGPAGPQGPVGPQGPQGEPGVDFDDTLLVSYSSLTSQNVNANGIFTYNIQNPNGSTFTAITANIANGTFTINEPGRYLFMWSFNLDNTNNTTASAIVSLFRNGSRVFLSGTPRVAPGEIGVVNGSIAVNANAGDVFALVNNSTRNVLSQIISSPISVTPAILGESTGINSGIGSWVQIVRVSD*