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NECEvent2014_8_5_scaffold_618_8

Organism: NECEvent2014_8_5_Escherichia_coli_50_14_partial

partial RP 22 / 55 MC: 3 BSCG 17 / 51 MC: 2 ASCG 9 / 38 MC: 2
Location: comp(5776..6141)

Top 3 Functional Annotations

Value Algorithm Source
TrbD n=17 Tax=Bacteria RepID=D4HR12_KLEPN similarity UNIREF
DB: UNIREF100
  • Identity: 97.5
  • Coverage: 121.0
  • Bit_score: 227
  • Evalue 7.80e-57
Conserved domain protein {ECO:0000313|EMBL:EGI47899.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 121.0
  • Bit_score: 238
  • Evalue 4.70e-60
trbD; IncF plasmid conjugative transfer protein TrbD similarity KEGG
DB: KEGG
  • Identity: 94.6
  • Coverage: 111.0
  • Bit_score: 208
  • Evalue 1.40e-51

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 366
ATGTTTATTTCCCTGATGACAGGGCAAACAGAAACAACGGAGATAAAAATGAACATGCGTAATATTAATATTATTACTGCACGCTCTGTACCGGATAAAAGCGTATCAGATGATTTTATGAATGCTGTTCTCAGTAACTGCACCACAAGAATCGTACTTCCTGCACTGAAGGAATTCGGTTCTGAATCATTGCCGCACAATTTTAATATGGCAGCTGTCGGTGTGATGAAGAAGGGTATGTCGATGAGCTTATTTTCTTCTCCGGGAAATACAGTAGTCTCCGGACAACCCTGTGCAGGAAAAACAAATCTGACAGTAGAGTTAATTTCTGCTGTTGTGGAGAGTAATAAAAAAGGAGAAGGGTAA
PROTEIN sequence
Length: 122
MFISLMTGQTETTEIKMNMRNINIITARSVPDKSVSDDFMNAVLSNCTTRIVLPALKEFGSESLPHNFNMAAVGVMKKGMSMSLFSSPGNTVVSGQPCAGKTNLTVELISAVVESNKKGEG*