ggKbase home page

ACD81_5

Alias: ACD81_2456.18783.58

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD81_5_1
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(37..447)
-----------------
DNA (411bp)
protein (137aa)
37..447 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:KKT42944.1}; TaxID=1619017 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWE2_44_13.;"
ACD81_5_2
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(573..932)
-----------------
DNA (360bp)
protein (120aa)
573..932 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:KKT42943.1}; TaxID=1619017 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWE2_44_13.;"
ACD81_5_3
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

3147..3488
-----------------
DNA (342bp)
protein (114aa)
3147..3488 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:KKT42941.1}; TaxID=1619017 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWE2_44_13.;"
ACD81_5_4
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

3481..4005
-----------------
DNA (525bp)
protein (175aa)
seg (db=Seg db_id=seg from=161 to=174)
Uncharacterized protein {ECO:0000313|EMBL:KKT42940.1}; TaxID=1619017 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWE2_44_13.;"
ACD81_5_5
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

4076..4369
-----------------
DNA (294bp)
protein (98aa)
4076..4369 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:KKT42939.1}; TaxID=1619017 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWE2_44_13.;"
ACD81_5_6
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists


4694..5194
-----------------
DNA (501bp)
protein (167aa)
50S ribosomal protein L10 n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SM48_9FIRM (db=UNIREF evalue=1.0e-14 bit_score=82.0 identity=30.72 coverage=88.622754491018)
rplJ; 50S ribosomal protein L10
Ribosomal_L10 (db=HMMPfam db_id=PF00466 from=2 to=98 evalue=3.0e-15 interpro_id=IPR001790 interpro_description=Ribosomal protein L10 GO=Cellular Component: intracellular (GO:0005622), Biological Process: ribosome biogenesis (GO:0042254))
Uncharacterized protein {ECO:0000313|EMBL:KKT42938.1}; TaxID=1619017 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWE2_44_13.;"
ACD81_5_7
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists


5344..5709
-----------------
DNA (366bp)
protein (122aa)
rplL; 50S ribosomal protein L7/L12
seg (db=Seg db_id=seg from=31 to=54)
seg (db=Seg db_id=seg from=16 to=29)
L12: ribosomal protein L7/L12 (db=HMMTigr db_id=TIGR00855 from=1 to=121 evalue=4.0e-52 interpro_id=IPR000206 interpro_description=Ribosomal protein L7/L12 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD81_5_8
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(5941..6396)
-----------------
DNA (456bp)
protein (152aa)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=1 to=120 evalue=4.3e-13 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
Acetyltransf_1 (db=HMMPfam db_id=PF00583 from=54 to=117 evalue=2.7e-05 interpro_id=IPR022610 interpro_description=GCN5-related N-acetyltransferase, C-terminal)
no description (db=Gene3D db_id=G3DSA:3.40.630.30 from=16 to=117 evalue=0.0002 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
GNAT (db=ProfileScan db_id=PS51186 from=2 to=138 evalue=12.896 interpro_id=IPR000182 interpro_description=GCN5-related N-acetyltransferase GO=Molecular Function: N-acetyltransferase activity (GO:0008080), Biological Process: metabolic process (GO:0008152))
ACD81_5_9
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

6745..7194
-----------------
DNA (450bp)
protein (150aa)
CheY-like (db=superfamily db_id=SSF52172 from=1 to=122 evalue=1.3e-18 interpro_id=IPR011006 interpro_description=CheY-like)
no description (db=Gene3D db_id=G3DSA:3.40.50.2300 from=5 to=122 evalue=9.2e-13)
Response_reg (db=HMMPfam db_id=PF00072 from=6 to=125 evalue=1.2e-12 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
no description (db=HMMSmart db_id=SM00448 from=4 to=134 evalue=8.0e-11 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
ACD81_5_10
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

7201..8508
-----------------
DNA (1308bp)
protein (436aa)
Macrolide export ATP-binding/permease protein MacB n=2 Tax=Clostridium butyricum RepID=B1QTA6_CLOBU (db=UNIREF evalue=3.0e-49 bit_score=199.0 identity=41.96 coverage=50.4587155963303)
ABC transporter
ABC_TRANSPORTER_1 (db=PatternScan db_id=PS00211 from=148 to=162 evalue=0.0 interpro_id=IPR017871 interpro_description=ABC transporter, conserved site GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887))
ABC TRANSPORTER (db=HMMPanther db_id=PTHR19222:SF32 from=5 to=233 evalue=2.8e-86)
ACD81_5_11
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

8524..9744
-----------------
DNA (1221bp)
protein (407aa)
hypothetical protein
seg (db=Seg db_id=seg from=319 to=344)
transmembrane_regions (db=TMHMM db_id=tmhmm from=366 to=388)
transmembrane_regions (db=TMHMM db_id=tmhmm from=318 to=340)
ACD81_5_12

Not on your lists

9918..10175
-----------------
DNA (258bp)
protein (86aa)
coiled-coil (db=Coil db_id=coil from=65 to=86 evalue=NA)
seg (db=Seg db_id=seg from=34 to=44)
seg (db=Seg db_id=seg from=73 to=82)
DUF2164 (db=HMMPfam db_id=PF09932 from=13 to=79 evalue=1.1e-19 interpro_id=IPR018680 interpro_description=Protein of unknown function DUF2164)
ACD81_5_13
GWC2_OD1_ACD81_39_22, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

10369..10800
-----------------
DNA (432bp)
protein (144aa)
MraZ protein
TIGR00242: protein MraZ (db=HMMTigr db_id=TIGR00242 from=1 to=143 evalue=2.7e-46 interpro_id=IPR003444 interpro_description=MraZ)
AbrB/MazE/MraZ-like (db=superfamily db_id=SSF89447 from=1 to=137 evalue=5.0e-46)
MRAZ_STAEQ_Q5HQ14; (db=BlastProDom db_id=PD006745 from=1 to=136 evalue=2.0e-40 interpro_id=IPR003444 interpro_description=MraZ)
ACD81_5_14

Not on your lists

10839..11729
-----------------
DNA (891bp)
protein (297aa)
S-adenosyl-methyltransferase MraW
seg (db=Seg db_id=seg from=255 to=278)
seg (db=Seg db_id=seg from=25 to=32)
S-adenosyl-L-methionine dependent methyltransferase, MraW type (db=HMMPIR db_id=PIRSF004486 from=1 to=296 evalue=3.8e-119 interpro_id=IPR002903 interpro_description=S-adenosyl-L-methionine-dependent methyltransferase, MraW GO=Molecular Function: methyltransferase activity (GO:0008168))
ACD81_5_15
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

11756..12064
-----------------
DNA (309bp)
protein (103aa)
seg (db=Seg db_id=seg from=17 to=28)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=26 evalue=6.0)
Uncharacterized protein {ECO:0000313|EMBL:KKT42929.1}; TaxID=1619017 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWE2_44_13.;"
ACD81_5_16
GWC2_OD1_ACD81_39_22, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

12153..13808
-----------------
DNA (1656bp)
protein (552aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Peptidoglycan glycosyltransferase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CCK5_THET1 (db=UNIREF evalue=3.0e-86 bit_score=323.0 identity=35.37 coverage=98.731884057971)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=24)
ACD81_5_17
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

13814..15124
-----------------
DNA (1311bp)
protein (437aa)
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase
seg (db=Seg db_id=seg from=266 to=277)
MUR LIGASE FAMILY MEMBER (db=HMMPanther db_id=PTHR23135 from=27 to=434 evalue=4.5e-66)
UDP-N-ACETYLMURAMOYLALANYL-D-GLUTAMYL-2,6-DIAMINOPIMELATE--D-ALANYL-D- ALANYL LIGASE (db=HMMPanther db_id=PTHR23135:SF3 from=27 to=434 evalue=4.5e-66 interpro_id=IPR005863 interpro_description=UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: regulation of cell shape (GO:0008360), Molecular Function: UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activ
ACD81_5_18
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

15445..15687
-----------------
DNA (243bp)
protein (81aa)
coiled-coil (db=Coil db_id=coil from=39 to=60 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:KKT42926.1}; TaxID=1619017 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWE2_44_13.;"
ACD81_5_19
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

15875..16804
-----------------
DNA (930bp)
protein (310aa)
seg (db=Seg db_id=seg from=275 to=286)
Abortive infection protein {ECO:0000313|EMBL:KKT42925.1}; TaxID=1619017 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWE2_44_13.;"
ACD81_5_20
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

18022..18636
-----------------
DNA (615bp)
protein (205aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=71 to=88)
transmembrane_regions (db=TMHMM db_id=tmhmm from=92 to=109)
seg (db=Seg db_id=seg from=14 to=27)
seg (db=Seg db_id=seg from=39 to=58)
Displaying 20 items

View Taxonomy