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ACD81_25

Alias: ACD81_2063.12492.50

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD81_25_1
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

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comp(21..1205)
-----------------
DNA (1185bp)
protein (395aa)
RNA polymerase, sigma 70 subunit, RpoD subfamily
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=40 to=151 evalue=1.3e-25 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
no description (db=Gene3D db_id=G3DSA:1.10.601.10 from=78 to=147 evalue=1.8e-19)
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=75 to=374 evalue=8.3e-13 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
ACD81_25_2
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

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comp(1491..2963)
-----------------
DNA (1473bp)
protein (491aa)
polynucleotide adenylyltransferase/metal dependent phosphohydrolase
polynucleotide adenylyltransferase/metal dependent phosphohydrolase
PolyA polymerase n=2 Tax=Brachyspira RepID=C0R197_BRAHW (db=UNIREF evalue=8.0e-91 bit_score=338.0 identity=40.27 coverage=89.4093686354379)
coiled-coil (db=Coil db_id=coil from=455 to=487 evalue=NA)
ACD81_25_3
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

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comp(3311..5038)
-----------------
DNA (1728bp)
protein (576aa)
NUDIX hydrolase
NUDIX hydrolase n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KSE8_9BACT (db=UNIREF evalue=1.0e-67 bit_score=261.0 identity=31.72 coverage=98.0902777777778)
seg (db=Seg db_id=seg from=134 to=147)
coiled-coil (db=Coil db_id=coil from=456 to=484 evalue=NA)
ACD81_25_4
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

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comp(5061..5258)
-----------------
DNA (198bp)
protein (66aa)
5061..5258 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:KKT42982.1}; TaxID=1619017 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWE2_44_13.;"
ACD81_25_5
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

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comp(5802..6191)
-----------------
DNA (390bp)
protein (130aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=38)
transmembrane_regions (db=TMHMM db_id=tmhmm from=45 to=67)
transmembrane_regions (db=TMHMM db_id=tmhmm from=82 to=104)
Uncharacterized protein {ECO:0000313|EMBL:KKT42983.1}; TaxID=1619017 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWE2_44_13.;"
ACD81_25_6
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

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comp(6206..7303)
-----------------
DNA (1098bp)
protein (366aa)
coiled-coil (db=Coil db_id=coil from=187 to=223 evalue=NA)
coiled-coil (db=Coil db_id=coil from=35 to=63 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=23 to=46)
ACD81_25_7
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(7624..8016)
-----------------
DNA (393bp)
protein (131aa)
7624..8016 - (rbs_motif=ATAA rbs_spacer=3bp)
Uncharacterized protein {ECO:0000313|EMBL:KKT42985.1}; TaxID=1619017 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWE2_44_13.;"
ACD81_25_8
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(8234..9511)
-----------------
DNA (1278bp)
protein (426aa)
Putative uncharacterized protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C4E6_9PLAN (db=UNIREF evalue=2.0e-18 bit_score=97.4 identity=22.51 coverage=96.7136150234742)
hypothetical protein (db=KEGG evalue=3.0e-15 bit_score=86.7 identity=20.91 coverage=95.7746478873239)
seg (db=Seg db_id=seg from=185 to=198)
Uncharacterized protein {ECO:0000313|EMBL:KKT42986.1}; TaxID=1619017 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWE2_44_13.;"
ACD81_25_9
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(9508..9918)
-----------------
DNA (411bp)
protein (137aa)
9508..9918 - (rbs_motif=ATAA rbs_spacer=8bp)
Uncharacterized protein {ECO:0000313|EMBL:KKT42987.1}; TaxID=1619017 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWE2_44_13.;"
ACD81_25_10
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(9911..10564)
-----------------
DNA (654bp)
protein (218aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=187 to=206)
transmembrane_regions (db=TMHMM db_id=tmhmm from=155 to=177)
transmembrane_regions (db=TMHMM db_id=tmhmm from=27 to=44)
Uncharacterized protein {ECO:0000313|EMBL:KKT42988.1}; TaxID=1619017 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWE2_44_13.;"
ACD81_25_11
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(10564..11124)
-----------------
DNA (561bp)
protein (187aa)
Putative uncharacterized protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C4E9_9PLAN (db=UNIREF evalue=2.0e-19 bit_score=98.6 identity=37.84 coverage=87.7005347593583)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KKT42989.1}; TaxID=1619017 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWE2_44_13.;"
ACD81_25_12
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(11191..11655)
-----------------
DNA (465bp)
protein (155aa)
seg (db=Seg db_id=seg from=2 to=13)
seg (db=Seg db_id=seg from=27 to=39)
seg (db=Seg db_id=seg from=135 to=154)
Uncharacterized protein {ECO:0000313|EMBL:KKT42990.1}; TaxID=1619017 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWE2_44_13.;"
ACD81_25_13
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

12079..12492
-----------------
DNA (414bp)
protein (138aa)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=17 evalue=5.0)
Uncharacterized protein {ECO:0000313|EMBL:KKT42991.1}; TaxID=1619017 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWE2_44_13.;"
Displaying 13 items

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