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NECEvent2014_2_5_scaffold_41_5

Organism: NECEvent2014_2_5_Clostridium_plasmid_43_21

RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: 2311..4098

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory system Conjugative DNA transfer family protein n=4 Tax=Clostridium difficile RepID=T2U2C6_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 595.0
  • Bit_score: 1189
  • Evalue 0.0
  • rbh
Putative conjugative transfer proteinTn1549-like, CTn4-Orf4 {ECO:0000313|EMBL:CEJ97683.1}; TRAG family protein {ECO:0000313|EMBL:CKG94051.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clos similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 595.0
  • Bit_score: 1189
  • Evalue 0.0
conjugative transfer protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 595.0
  • Bit_score: 1189
  • Evalue 0.0

Lists

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Notes

100% identity to conjugal transfer protein TraG from Peptoclostridium difficile Jill Banfield (7/8/14)

Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1788
ATGAAGCCGGAACTTAAAAAGCTGCTTATCCTAAATGCCCCCTATCTGCTCTTTGTCTATCTCTTTGATAAAGTCGGACAGGCGGTGCGGCTCTCTCCGGGGGCTGACCTTTCCGGCAAGGTGCTTTCCCTTGCAGACGGCTTTTCCGCTGCCTTTGCAAACCCGCTTCCGAGTTTTTTTCCTGCCGATTTGCTTATCGGTATTGTGGGGGCTGTCCTTATCCGGCTTATGGTGTACTTCAAAGGCAAGAACGCGAAGAAATATCGAAAAGGCATAGAATACGGTTCTGCCCGTTGGGGCAACGCCGAAGATATAAAACCCTACACCGACCCGGTATTTCAAAATAATGTGCTGCTGACACAGACGGAACGGCTTACCATGAACAGCCGCCCGAAGCAGACGAAGTATGCAAGGAATAAAAATATCCTTGTTATCGGGGGAAGCGGCAGCGGCAAGACAAGATTTTTTGTGAAGCCCAACTTAATGCAAATGCACAGCAGCTACGTTGTAACCGACCCGAAAGGGACGGTTTTAGTCGAGTGCGGGAAGCTCTTACAGCGCGGCGGGTATCGGATAAAGGTGCTGAATACAATCAATTTCAAGAAATCCATGCGCTACAATCCCTTTGCCTATATCCGCAGCGAAAAAGACATTTTGAAACTGGTAAATACCTTGATTGCCAACACCAAAGGGGACGGGGAAAAAGCCGGGGAGGATTTTTGGGTAAAATCGGAACGGCTCTTTTACTGCGCCCTTATCGGCTACATTTGGTACGAAGCCCCGGAGGAAGAAAAGAACTTTACGACGCTGCTTGAAATGATAAATGCCAGTGAAGCCCGCGAGGACGACCCGGAATTTCAGTCCCCCGTTGACCTCATGTTTGAACGGTTGGAGGAAAAAGACCCGGAACACTTTGCCGTCCGGCAGTATAAGAAATTCTTGTTATCTGCGGGAAAAACACGAAGCTCTATCCTCATTTCCTGCGGTGCGCGGCTTGCCCCTTTTGACATTAAGGAGCTGCGCGACCTTATGGAAACCGACGAAATGGAGCTTGACACCATAGGCGACCGAAAGACTGCCCTGTTTGTTATCATTTCCGACACCGACGATACCTTTAACTTTGTCGTATCAATCCTTTACACGCAGCTTTTCAATCTGCTTTGCGACAAGGCAGATGATGAATACGGCGGCAGGCTGCCCGTCCATGTGCGCTGTCTGTTAGACGAGTTTGCGAATATCGGACAGATACCGAAGTTTGAAAAGCTCATAGCCACCATACGAAGCAGGGAAATCTCCGCGTCGATTATCTTACAGTCGCAAAGCCAGTTAAAGGCAATCTATAAGGACAACGCCGATACCATAGTCGGCAACTGCGACACCACCCTTTTCTTGGGCGGCAAGGAGAAAACCACCCTCAAAGAAACGTCGGAAATCTTGGGGAAAGAAACCATTGACAGCTTCAACACTTCCGAGAACCGGGGGCGCGAGGTATCGCATGGGCTGAACTATCAGAAGTTAGGCAAGCAGCTTATGACGGAAGATGAAATAGCGGTTATGGACGGCGGGAAATGTATTTTACAGCTACGAGGGGTGCGCCCGTTCTTCTCTGATAAGTACGACATTACAAAGCACCCCAACTATAAATATCTTTCCGACTATGACAAGAAAAATACTTTTGATATGGAGAAGCATTTAAGGCGCAGACCCGCCCTTGTGAAGCCGGACGAAGTATTTGACTACTACGAAATCAGCGAAAGCGATTTGCAGGAGGACACCGACCATGAATAG
PROTEIN sequence
Length: 596
MKPELKKLLILNAPYLLFVYLFDKVGQAVRLSPGADLSGKVLSLADGFSAAFANPLPSFFPADLLIGIVGAVLIRLMVYFKGKNAKKYRKGIEYGSARWGNAEDIKPYTDPVFQNNVLLTQTERLTMNSRPKQTKYARNKNILVIGGSGSGKTRFFVKPNLMQMHSSYVVTDPKGTVLVECGKLLQRGGYRIKVLNTINFKKSMRYNPFAYIRSEKDILKLVNTLIANTKGDGEKAGEDFWVKSERLFYCALIGYIWYEAPEEEKNFTTLLEMINASEAREDDPEFQSPVDLMFERLEEKDPEHFAVRQYKKFLLSAGKTRSSILISCGARLAPFDIKELRDLMETDEMELDTIGDRKTALFVIISDTDDTFNFVVSILYTQLFNLLCDKADDEYGGRLPVHVRCLLDEFANIGQIPKFEKLIATIRSREISASIILQSQSQLKAIYKDNADTIVGNCDTTLFLGGKEKTTLKETSEILGKETIDSFNTSENRGREVSHGLNYQKLGKQLMTEDEIAVMDGGKCILQLRGVRPFFSDKYDITKHPNYKYLSDYDKKNTFDMEKHLRRRPALVKPDEVFDYYEISESDLQEDTDHE*