ggKbase home page
Advanced Search
Search Help

NECEvent2014_2_5_scaffold_41_17

Organism: NECEvent2014_2_5_Clostridium_plasmid_43_21

RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: 14717..18748

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
YodL-like family protein n=4 Tax=Clostridium difficile RepID=T2U2Y5_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 999.99
  • Bit_score: 2715
  • Evalue 0.0
  • rbh
putative antirestriction proteinTn1549-like,CTn4-Orf16 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 999.99
  • Bit_score: 2715
  • Evalue 0.0
Domain of uncharacterised function (DUF955)./Antirestriction protein (ArdA) {ECO:0000313|EMBL:CKG93809.1}; Putative antirestriction proteinTn1549-like,CTn4-Orf16 {ECO:0000313|EMBL:CEJ97671.1}; TaxID=1 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 999.99
  • Bit_score: 2715
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

100% ID to DNA primase in Peptoclostridium difficile Jill Banfield (7/8/14)

Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 4032
ATGGCAAGTTTACGGGACACCGTAAAGGACTATCAAGAAGAATTAAGGGACGGTATCGCTTGGGTGGCGTTTTGGAAAACGGGACGTTCTTGGAACGCCGAGCATTTTTCCCTTGAAATGGGCGATATTCTCTACCCGGAGGACAGAAGCCGCATGGAAGAAATCAAGCAGGCTGACCCTGCCGCCGTTGTGGTAAACGGCTATTATTCCGGCTATCTTGGCGAGGATATGAGCCTTGACGAGCTGACCGCCGGGGTACGCCGCCACTACGAAAACGGATATAGCAATATCGGGGAATTTATCGAGGCCCACGACAACAGGCTGCCGCCGGAGCTTATCGAGGAAGCAAGAGCCGCCGCCCACGCTGCGGGGCTGCCTTTCTCTGAAAAAGCCTACCGGGACGGCGAAGAACCCGACCCCTATATTTTTGACGGGAGCATGAGCATGGAGGACTACGAACTTATGCACCGTATGATTGAAAACGAAAGGAGTGAACGCATGGAAGAAACGATTTTAAGCGGGTATCTTTCTAATCTTGGAAAGTACACCGAGGGCAGACCTGCGGGCGAATGGGTATCATTCCCCACGACTGCCGAGCATTTGAAAGAAGCCTTTGACCGTATCGGGATAGACTTCAAGAACTATGGAGAATGGTATTTTACAGAATTTCAATCTTCCGTTCCGGGTTTAACAACACACCTTAACGAATTTTCCCACCCCGACGAACTGAACTATTTGAGCGAACTTTTGAAAATGCAGTTTGACGACGACCGGGAAAAATTTGTTGCAGCTATGGAATACGGCGACCATACAAGGGACTTGCAGGACATCATCAACCTTGCACAAAACCTTGATTGTTACTGGCTTTATCCGTCCATACAGTGTGAGGAAGATTACGGGCATTATCTGATTGAAGAACTGGACGAGTTGGAGTTGCCCGAAGAAGCAAAAAAATATTTCATGTATGAGGAATACGGGCGGGACGCTGCTATCAATGACGGGGGCAGCTTTACCGAACAGGGCTATATCTACAACAACCGCAACACCTTTACAGAATGGTACGACGGGTGCGAAGTGCCGGAGGAATACCGGGTAACGCCGCAGCCGCCAGTACAGGAAAAGGAACAGGCAGACCTTGACACTTCCGTAGCCATACAAACCACCGCCACAGAGCAGCCCCCGGTTCTCCCGATTATCCTATCTTCTGAAAAGCCCGCTGACAAAATGAAAGAGATTACCGACCGACTGGAACAAGGAATTTTAGGACTGTATGAAAGCGACCGTTACGCCGATTATCTGCGTACCATGTCAAAATTCCATGATTACAGCCTTAACAATACAATCCTTATCGCCATGCAGGGCGGCAATCTTGTGAAAGGCTATAAACAATGGGAAAAGGAATTTGACCGCCATGTAAAGCCCGGAGAAAAAGCTATCAAGATACTTGCGCCGTCCCCGTTTACCGTTAAGAAACAGGTGGAAAAAATCGACCCGGACACCCAAAAGCCTGTTTTCGATAAGGACGGGAAACCTGTTACCGAGGAAAGGGAAATCAAGATACCCGCTTTTCGTGTGGTATCTGTCTTTGATATTTCACAGACCGAGGGAAAGGAGCTTCCTGCCCTTACCTATGAGCTGACAGGCAACGTGGAACAATACAAGGATTTTTTCGCTGCCCTTGAAAAGACTTTCCCCTTTGCTATGGGATTTGAAGCACTAAGCGGCGGCGTAAAAGGACGCTGCAATTATGAGGAAAAGCGTATCATCATCAACGAGGGCATGGACGAATTGCAGAATATCAAGACTGCAATCCATGAAATCGCCCACGCCACGCTGCATGATACCGCCCTTGCTATGCCGGAACGCCCCGACCGCCGCACCCGCGAGGTACAGGCGGAAAGCGTCGCCTATGCTGTCTGCCAACATTACGGGCTTGATACGTCGGATTATTCTTTTGGATATATCGCCGGGTGGAGCAGCGGAAAAGAACTTGCAGAACTGAAAGGCTCTCTTGAAACAATCCGCAGTACCGCCGCAAGTCTGATTGATACCATAGACGGACATTTTGCAGAAATCCAAAAGACACAGAATAAGGAACAGACCACCGAACAGGCGCAGCCCGCACAGGAAACCGCCAAACAGCCCGAAACAGAAATAGCCGCGCCGGAGCTTCCCGAAGAAAAAGCCCCTGCAAAGGAGCAAGACGGACAGCCGGAGCAGACCACGCAGACCGCCGCCCCTTATTACACTATCAATGAAGCTGCCGCCAAACGTGCAAAGGATATGAACAGTTTTTCCGATTATAAGCAAGGCAGCGCGACGGCTGAATACAGGCATTATGTTGATGAAGCCGTACAAATCGCAGAAAGGCAGAAACAACGGGTTGACCCGATGTACCATGAGAAAATCGACAGCCTGCTTGACACCTACGCCCGGAAACTGGCGGCGAACATGAACAAAGGCTATGAGATTGACGCGCGTGTTCCCTCTATCCTGATTGCGGGCGGCTCTAACTTCCCCACAAGGAAGAAAGAAAAGCAGAACGCAGCCCGCGACAGCAATTACCGGGAATGGCAGGACATACAAGGACTTCTTGATAAAATCCGCAGCACCGGCATGGGCGGTATCAGCGCAGACGACCCACAGGCAGTACAGAAGTTAGAAAAGAAACTGGAAAGCCTTGAAAAATCACAGGAAACCATGAAAGCCGTAAACGCCTATTACCGTAAGCATAAGACCCTTGACGGCTGCCCGCATTTACCGCCGGAGGAACTGGAAAAACTGAAAGCAGACATGGCGAGCAGTTGGCATTTGGAGGACAAGCCCTTTGCGACTTGGGCGTTATCCAACAACAGCGCAGAAATCCGACGCGTGAAAGACCGTATCAAATCCCTTTCACAGCAAAAAGAAATCGGTTTTGTGGGTTGGGAATTTGACGGCGGTAAGGTGGAAGCAAACACCGAAGCGAACCGACTGCAAATCTTCTTTGAAGATAAGCCGGACGAAACCACGCGGGAAGCCTTAAAAAGTAATGGCTTCCGTTGGTCGCCAAAAGCAGGGGCATGGCAGCGGCAGCTTACCAGTAATGCCTACTATGCGGCTGATTATGTCAAGGCGATTGCACCTCTTACCGGGGAAAAGCCTACCGAGTTACAGTGGGCGCATATCCGGGCGCAAAAGGTAGCTGCACAAGAACAACCCGCACAGGAGCAGCCGGAACAGGAAGCCCCACAGGACAAAGACACCTTTTCCATTTATCAGATAAAAGGCGAGGAAGAAACAAGGGACTTGCGCTTTGAACCTTACGACCGTCTGACTGCCACAGGACACCGGGTAGACCCGAAAAACTATGCGCTTGTCTATTCCGCAGAGCTTACGCCGGGGACTTCCCTTGAAGATATTTACACCCGCTTCAATATCGACCACCCGAAAGATTTTAAGGGACACAGCCTTTCCGTTTCCGACGTGGTGGTGCTTCATCAGAACGGGCAGGACACCGCCCACTATGTAGACAGCTTCGGTTATAAGGAAGTGCTGGAGTTTTTCAAGGAGCAGGAAAAAGCCCTCATTCCCGACGACTTGGAAACGGGCGAAACAATCAAAACACCGAGAGGGACTTTCTATGTAACCGCCATGAGCCGCGAGCAAATGGAAGCTGCCGGATATGGATTGCACCACCAGTCCGACGACGGAAAATATCTGATTATGGGGAACGGCACTAGGGCTTTTGCTGTTCCCGTTCAGCCGGAGAACTATCTGAAAGCTGCCGAGCAGACCACAGAGCAAAACTACAACATGATTGACGGGCAGATAAACAACACCCCGACTATCGCAGAACTGGAAGCAAAGGTAAAGGCAGGAGAAACCATTTCCCTTGTTGACCTTGCGGAAGCTGTCAAGGCTGACAAGGAACGCGGCAAGGCAGCAAAAACGGAAAAGAAGCCCTCTATCCGGGCGCAGCTTAGAGCAGACAAAGAAAAAACCGCACAGAAAAAAGCGGCAAAATCAAAAAATCACGAATTGGAGGTATGA
PROTEIN sequence
Length: 1344
MASLRDTVKDYQEELRDGIAWVAFWKTGRSWNAEHFSLEMGDILYPEDRSRMEEIKQADPAAVVVNGYYSGYLGEDMSLDELTAGVRRHYENGYSNIGEFIEAHDNRLPPELIEEARAAAHAAGLPFSEKAYRDGEEPDPYIFDGSMSMEDYELMHRMIENERSERMEETILSGYLSNLGKYTEGRPAGEWVSFPTTAEHLKEAFDRIGIDFKNYGEWYFTEFQSSVPGLTTHLNEFSHPDELNYLSELLKMQFDDDREKFVAAMEYGDHTRDLQDIINLAQNLDCYWLYPSIQCEEDYGHYLIEELDELELPEEAKKYFMYEEYGRDAAINDGGSFTEQGYIYNNRNTFTEWYDGCEVPEEYRVTPQPPVQEKEQADLDTSVAIQTTATEQPPVLPIILSSEKPADKMKEITDRLEQGILGLYESDRYADYLRTMSKFHDYSLNNTILIAMQGGNLVKGYKQWEKEFDRHVKPGEKAIKILAPSPFTVKKQVEKIDPDTQKPVFDKDGKPVTEEREIKIPAFRVVSVFDISQTEGKELPALTYELTGNVEQYKDFFAALEKTFPFAMGFEALSGGVKGRCNYEEKRIIINEGMDELQNIKTAIHEIAHATLHDTALAMPERPDRRTREVQAESVAYAVCQHYGLDTSDYSFGYIAGWSSGKELAELKGSLETIRSTAASLIDTIDGHFAEIQKTQNKEQTTEQAQPAQETAKQPETEIAAPELPEEKAPAKEQDGQPEQTTQTAAPYYTINEAAAKRAKDMNSFSDYKQGSATAEYRHYVDEAVQIAERQKQRVDPMYHEKIDSLLDTYARKLAANMNKGYEIDARVPSILIAGGSNFPTRKKEKQNAARDSNYREWQDIQGLLDKIRSTGMGGISADDPQAVQKLEKKLESLEKSQETMKAVNAYYRKHKTLDGCPHLPPEELEKLKADMASSWHLEDKPFATWALSNNSAEIRRVKDRIKSLSQQKEIGFVGWEFDGGKVEANTEANRLQIFFEDKPDETTREALKSNGFRWSPKAGAWQRQLTSNAYYAADYVKAIAPLTGEKPTELQWAHIRAQKVAAQEQPAQEQPEQEAPQDKDTFSIYQIKGEEETRDLRFEPYDRLTATGHRVDPKNYALVYSAELTPGTSLEDIYTRFNIDHPKDFKGHSLSVSDVVVLHQNGQDTAHYVDSFGYKEVLEFFKEQEKALIPDDLETGETIKTPRGTFYVTAMSREQMEAAGYGLHHQSDDGKYLIMGNGTRAFAVPVQPENYLKAAEQTTEQNYNMIDGQINNTPTIAELEAKVKAGETISLVDLAEAVKADKERGKAAKTEKKPSIRAQLRADKEKTAQKKAAKSKNHELEV*