Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
rluD; 23S RNA-specific pseudouridylate synthase | similarity |
KEGG
DB: KEGG |
57.8 | 166.0 | 184 | 2.40e-44 | pcu:pc0355 |
seg (db=Seg db_id=seg from=171 to=180) | iprscan |
interpro
DB: Seg |
null | null | null | null | pcu:pc0355 |
seg (db=Seg db_id=seg from=120 to=131) | iprscan |
interpro
DB: Seg |
null | null | null | null | pcu:pc0355 |
PSI_RLU (db=PatternScan db_id=PS01129 from=147 to=161 evalue=0.0 interpro_id=IPR006224 interpro_description=Pseudouridine synthase, RluC/RluD, conserved site GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) | iprscan |
interpro
DB: PatternScan |
null | null | null | 0.0 | pcu:pc0355 |
RIBOSOMAL PSEUDOURIDINE SYNTHASE (db=HMMPanther db_id=PTHR10436 from=1 to=170 evalue=4.1e-24) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 4.10e-24 | pcu:pc0355 |
Pseudouridine synthase (db=superfamily db_id=SSF55120 from=75 to=170 evalue=2.0e-22 interpro_id=IPR020103 interpro_description=Pseudouridine synthase, catalytic domain GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) | iprscan |
interpro
DB: superfamily |
null | null | null | 2.00e-22 | pcu:pc0355 |
S4 (db=HMMPfam db_id=PF01479 from=20 to=65 evalue=2.1e-09 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 2.10e-09 | pcu:pc0355 |
Alpha-L RNA-binding motif (db=superfamily db_id=SSF55174 from=18 to=75 evalue=1.4e-08) | iprscan |
interpro
DB: superfamily |
null | null | null | 1.40e-08 | pcu:pc0355 |
PseudoU_synth_2 (db=HMMPfam db_id=PF00849 from=92 to=170 evalue=2.7e-08 interpro_id=IPR006145 interpro_description=Pseudouridine synthase, RsuA and RluB/C/D/E/F GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 2.70e-08 | pcu:pc0355 |
no description (db=HMMSmart db_id=SM00363 from=19 to=78 evalue=9.1e-08 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 9.10e-08 | pcu:pc0355 |
S4 (db=ProfileScan db_id=PS50889 from=19 to=91 evalue=13.462 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 1.35e+01 | pcu:pc0355 |
rluD; 23S RNA-specific pseudouridine synthase D; K06180 ribosomal large subunit pseudouridine synthase D [EC:5.4.99.12] alias=ACD17_C00054G00006,ACD17_528724.9302.5G0006,ACD17_528724.9302.5_6 id=11783 tax=ACD17 species=Candidatus Protochlamydia amoebophila genus=Candidatus Protochlamydia taxon_order=Chlamydiales taxon_class=Chlamydiia phylum=Chlamydiae organism_group=Chlamydiae organism_desc=CvE6 | similarity |
UNIREF
DB: UNIREF90 |
100.0 | null | 325 | 7.50e-87 | pcu:pc0355 |
rluD; 23S RNA-specific pseudouridylate synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=RIFCSPLOWO2_02_FULL_Chlamydiae_45_22_curated |
UNIPROT
DB: UniProtKB |
92.9 | 169.0 | 317 | 9.10e-84 | ggdbv1_88562833 |