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ACD17_54

Alias: ACD17_528724.9302.5

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD17_54_1
R_Chlamydiae_45_22, Chlamydiia, Chlamydiae, Bacteria

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comp(2..283)
DNA (282bp) protein (94aa)
S10 family peptidase (db=KEGG evalue=4.0e-08 bit_score=60.1 identity=38.03 coverage=72.3404255319149)
seg (db=Seg db_id=seg from=7 to=12)
alpha/beta-Hydrolases (db=superfamily db_id=SSF53474 from=27 to=92 evalue=8.2e-09)
S10 family peptidase alias=ACD17_C00054G00001,ACD17_528724.9302.5G0001,ACD17_528724.9302.5_1 id=11778 tax=ACD17 species=Synechococcus sp. JA-3-3Ab genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria organism_group=Chlamydiae organism_desc=CvE6
ACD17_54_2
R_Chlamydiae_45_22, Chlamydiia, Chlamydiae, Bacteria

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comp(280..1623)
DNA (1344bp) protein (448aa)
peptidase S10 serine carboxypeptidase
peptidase S10 serine carboxypeptidase
UPI0001D5BE64 related cluster n=1 Tax=unknown RepID=UPI0001D5BE64 (db=UNIREF evalue=2.0e-86 bit_score=323.0 identity=40.98 coverage=95.0892857142857)
alpha/beta-Hydrolases (db=superfamily db_id=SSF53474 from=14 to=431 evalue=3.3e-52)
ACD17_54_3
R_Chlamydiae_45_22, Chlamydiia, Chlamydiae, Bacteria

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1841..4315
DNA (2475bp) protein (825aa)
Putative uncharacterized protein n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MEB7_PARUW (db=UNIREF evalue=0.0 bit_score=725.0 identity=43.5 coverage=98.5454545454545)
hypothetical protein
hypothetical protein
pcu:pc0358 hypothetical protein alias=ACD17_C00054G00003,ACD17_528724.9302.5G0003,ACD17_528724.9302.5_3 id=11779 tax=ACD17 species=Candidatus Protochlamydia amoebophila genus=Candidatus Protochlamydia taxon_order=Chlamydiales taxon_class=Chlamydiia phylum=Chlamydiae organism_group=Chlamydiae organism_desc=CvE6
ACD17_54_4
R_Chlamydiae_45_22, Chlamydiia, Chlamydiae, Bacteria

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comp(4330..4590)
DNA (261bp) protein (87aa)
hypothetical protein
seg (db=Seg db_id=seg from=41 to=50)
Prokaryotic type KH domain (KH-domain type II) (db=superfamily db_id=SSF54814 from=2 to=59 evalue=7.6e-07 interpro_id=IPR009019 interpro_description=K Homology, prokaryotic type GO=Molecular Function: RNA binding (GO:0003723))
KH_1 (db=HMMPfam db_id=PF00013 from=32 to=56 evalue=2.2e-05 interpro_id=IPR018111 interpro_description=K Homology, type 1, subgroup GO=Molecular Function: RNA binding (GO:0003723))
ACD17_54_5

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4969..5181
DNA (213bp) protein (71aa)
4969..5181 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKE07892.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD17_54_6
R_Chlamydiae_45_22, Chlamydiia, Chlamydiae, Bacteria

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comp(5190..5732)
DNA (543bp) protein (181aa)
rluD; 23S RNA-specific pseudouridylate synthase
seg (db=Seg db_id=seg from=171 to=180)
seg (db=Seg db_id=seg from=120 to=131)
PSI_RLU (db=PatternScan db_id=PS01129 from=147 to=161 evalue=0.0 interpro_id=IPR006224 interpro_description=Pseudouridine synthase, RluC/RluD, conserved site GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982))
ACD17_54_7
R_Chlamydiae_45_22, Chlamydiia, Chlamydiae, Bacteria

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comp(6077..6235)
DNA (159bp) protein (53aa)
6077..6235 - (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Chlamydiae_45_22_curated
ACD17_54_8
R_Chlamydiae_45_22, Chlamydiia, Chlamydiae, Bacteria

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6539..7546
DNA (1008bp) protein (336aa)
hemA; glutamyl-tRNA reductase (EC:1.2.1.70)
seg (db=Seg db_id=seg from=308 to=322)
GLUTR (db=PatternScan db_id=PS00747 from=154 to=177 evalue=0.0 interpro_id=IPR018214 interpro_description=Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, conserved site)
GlutR_N (db=HMMPfam db_id=PF05201 from=23 to=207 evalue=2.7e-28 interpro_id=IPR015895 interpro_description=Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO=Molecular Function: glutamyl-tRNA reductase activity (GO:0008883), Biological Process: tetrapyrrole biosynthetic process (GO:0033014), Molecular Function: NADP or NADPH binding (GO:0050661), Biological Process: oxidation reduction (GO:0055114))
ACD17_54_9

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comp(7766..9124)
DNA (1359bp) protein (453aa)
Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R5L4_9CHLA (db=UNIREF evalue=0.0 bit_score=659.0 identity=66.02 coverage=98.6754966887417)
asnS; asparaginyl-tRNA synthetase
asnS; asparaginyl-tRNA synthetase
asnS: asparaginyl-tRNA synthetase (db=HMMTigr db_id=TIGR00457 from=3 to=452 evalue=7.6e-274 interpro_id=IPR004522 interpro_description=Asparaginyl-tRNA synthetase, class IIb GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: asparagine-tRNA ligase activity (GO:0004816), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: asparaginyl-tRNA aminoacylation (GO:0006421))
ACD17_54_10
R_Chlamydiae_45_22, Chlamydiia, Chlamydiae, Bacteria

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comp(9105..9335)
DNA (231bp) protein (77aa)
nfo; Endonuclease IV (EC:3.1.21.2)
AP_NUCLEASE_F2_3 (db=PatternScan db_id=PS00731 from=10 to=26 evalue=0.0 interpro_id=IPR018246 interpro_description=AP endonuclease, family 2, zinc binding site GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: endonuclease activity (GO:0004519), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281), Molecular Function: zinc ion binding (GO:0008270))
ENDONUCLEASE IV (ENDODEOXYRIBONUCLEASE IV) (db=HMMPanther db_id=PTHR21445 from=2 to=73 evalue=4.8e-19 interpro_id=IPR001719 interpro_description=Endodeoxyribonuclease IV GO=Molecular Function: DNA binding (GO:0003677), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281), Molecular Function: zinc ion binding (GO:0008270), Molecular Function: deoxyribonuclease IV (phage-T4-induced) activity (GO:0008833))
Xylose isomerase-like (db=superfamily db_id=SSF51658 from=2 to=73 evalue=3.0e-16 interpro_id=IPR013022 interpro_description=Xylose isomerase-like, TIM barrel domain)
Displaying 10 items

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