ggKbase home page

NECEvent2014_8_6_scaffold_2755_1

Organism: NECEvent2014_8_6_Clostridium_butyricum_29_21

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 15 / 38 MC: 1
Location: comp(3..860)

Top 3 Functional Annotations

Value Algorithm Source
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clost similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 286.0
  • Bit_score: 587
  • Evalue 9.80e-165
tRNA-dihydrouridine synthase n=2 Tax=Clostridium butyricum RepID=M8JCW6_CLOBU similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 286.0
  • Bit_score: 587
  • Evalue 6.90e-165
  • rbh
dihydrouridine synthase family protein similarity KEGG
DB: KEGG
  • Identity: 75.9
  • Coverage: 286.0
  • Bit_score: 455
  • Evalue 1.20e-125

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. IBUN125C → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 858
ATGAAATATTATTTTGCACCAATGGAAGGCATAACAGGTCATATATATCGAAATGCGTATGAGAAGTTTTTTCATAATATAGATAAATATTTTACACCATTCATAATTCCAAATGAAAGTAAAAGGCTAAATACAAAAGAACTTATTGATGTTTTGCCAGAAAACAATAAGGGGATAAGCATAGTCCCTCAAATATTAACAAATGATTCTGAAGGTTTTATACTTACTTCTAAAAAACTTCAGGAACTTGGATATTCTGAAATAAATTTGAATTTAGGGTGTCCATCTGGAACAGTTGTTGGAAAAGGCAGAGGATCAGGTTTTTTAGCTAAAAGAGAAGAATTGGACAAATTTCTATATGAAATATTTGAAAAGAATAATATTAAAATTTCAATAAAAACTAGGATAGGAAAGGATAGTAGAGATGAGTTTTACGACCTTATACAAATATATAATAAATATCCTTTAGAAGAACTTATAATACATCCAAGAACTCAGAAAGATTTTTATGGAAATAAGCCTGATTGGGAAGTTTTTAAGGATGCACTTTCTTTAAGTAACAATCCTGTTTGTTATAATGGAGATATTTTTACAAATGATAATTATACAAAGTTTACAAATTTATTTCCAGAAGTAGATAGGATAATGATTGGACGAGGTATACTTGCAAATCCTGGATTAATAAACGAGATTATAGGAAATGACATGATTTCTAAAGAAAAGATGAAAGCTTTTCATGATGAAATTCTAAATGCATATATAGATTTATATCCAGAAGATATAGGTACATTATTCAAGATGAAAGAATTATGGTCATATATGATTTATATATTTTCAAATGGAAAAGAATATCTTAAA
PROTEIN sequence
Length: 286
MKYYFAPMEGITGHIYRNAYEKFFHNIDKYFTPFIIPNESKRLNTKELIDVLPENNKGISIVPQILTNDSEGFILTSKKLQELGYSEINLNLGCPSGTVVGKGRGSGFLAKREELDKFLYEIFEKNNIKISIKTRIGKDSRDEFYDLIQIYNKYPLEELIIHPRTQKDFYGNKPDWEVFKDALSLSNNPVCYNGDIFTNDNYTKFTNLFPEVDRIMIGRGILANPGLINEIIGNDMISKEKMKAFHDEILNAYIDLYPEDIGTLFKMKELWSYMIYIFSNGKEYLK