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NECEvent2014_8_6_scaffold_117_14

Organism: NECEvent2014_8_6_Escherichia_coli_51_30_partial

partial RP 28 / 55 MC: 5 BSCG 23 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: comp(13711..15891)

Top 3 Functional Annotations

Value Algorithm Source
Type IV conjugative transfer system coupling protein TraD n=1 Tax=Escherichia coli DEC8D RepID=H5AMU2_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 98.0
  • Coverage: 738.0
  • Bit_score: 1459
  • Evalue 0.0
  • rbh
Protein traD {ECO:0000313|EMBL:EQO70716.1}; TaxID=1280991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 41 similarity UNIPROT
DB: UniProtKB
  • Identity: 97.2
  • Coverage: 741.0
  • Bit_score: 1453
  • Evalue 0.0
conjugal transfer protein TraD similarity KEGG
DB: KEGG
  • Identity: 96.2
  • Coverage: 732.0
  • Bit_score: 1435
  • Evalue 0.0

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2181
ATGAGTTTTAACGCAAAGGATATGACCCAGGGCGGTCAGATTGCGTCCATGCGTATCCGCATGTTCAGCCAGATCGCCAATATCATGCTTTACTGCCTGTTTATTTTTTTCTGGATCCTCGTTGGTCTGGTTTTATGGGTAAAAATAAGCTGGCAGACGTTTGTAAATGGCTGCATTTACTGGTGGTGTACCACGCTGGAAGGCATGCGGGATTTAATCAGGTCCCAGCCGGTCTATGAGATCCAGTATTACGGCAAAACCTTCCGGATGAACGCGGCTCAGGTCCTGCATGACAAATACATGATCTGGTGCGGAGAGCAGCTATGGTCTGCATTCGTTCTGGCGTCTGTCGTGGCCCTGGTTATTTGCCTGATCACCTTCTTTGTTGTCTCCTGGATTCTGGGGCATCAGGGGAAACAGCAGAGTGAAAATGAGGTGACCGGCGGGCGTCAGCTGACGGATAACCCGAAAGAAGTGGCCCGGATGCTGAAAAAAAGCGGAGAGGACTCGGATATCCGGATTGGCGATTTGCCGATTATCCGGGATTCTGAAATCAAGAACTTTTGTCTGCACGGCACGGTCGGGGCCGGTAAGTCGGAAGTTATCCGACGTCTGGCCAACTACGCCCGTCAGCGTGGTGATATGGTGGTGATTTATGACCGTTCGGGGGAATTTGTCAAAAGTTACTATGATCCCTCCATCGATAATATCCTGAATCCGCTGGATGCCCGCTGTGTCGCCTGGGATTTATGGAAGGAGTGCCTGACACAGCCGGATTTTGATAATGTCGCGAACACGCTGATCCCGATGGGGACGAAGGAAGACCCGTTCTGGCAGGGTTCAGGACGTACCATTTTTGCGGAAGCGGCGTTCCTGATGCGTAATGACCCCAACCGCAGCTACAGCAAACTGGTGGACACACTGCTTTCCATCAAAATCGAAAAACTGCGTACCTTCCTGCGTAATTCACCGGCGGCCAACCTGGTGGAAGAGAAAATTGAGAAAACGGCGATTTCCATCCGTGCTGTGCTGACCAACTACGTGAAAGCCATCCGTTACCTGCAGGGGATTGAGCATAACGGTGAACCCTTCACCATCCGTGACTGGATGCGGGGTGTCCGGGAAGATAAGAAAAACGGCTGGCTGTTTATCTCGTCGAACGCCGACACCCATGCCTCCCTGAAGCCAGTGGTTTCCATGTGGCTGTCCATTGCCATTCGTGGCCTGATGGCGATGGGGGAGAACCGTAACCGTCGTGTGTGGTTCTTCTGTGACGAGTTGCCCACGCTGCACAAACTGCCGGACCTGGTGGAGATCCTGCCGGAAGCCCGTAAGTTCGGTGGCTGTTATGTGTTCGGTATCCAGTCCTATGCCCAGCTGGAAGATATCTACGGTGAGAAATCGGCAGCCTCGCTGTTTGACGTTATGAACACCCGTGCCTTTTTTCGTTCCCCCAGCCATAAGATTGCAGAGTTCGCTGCCGGTGAAATTGGTGAGAAAGAGCACCTGAAAGCCAGCGAGCAGTATTCCTACGGCGCTGACCCGGTACGTGACGGGGTATCGACCGGTAAGGATATGGAGCGTCAGACGCTGGTCAGTTATTCCGACATTCAGTCTCTGCCGGATCTGACCTGCTATGTCACTCTGCCCGGACCGTATCCGGCAGTAAAACTCTCCCTGAAATATCAGGAACGTCCGAAGGTTGCTCCGGAGTTTATTCCGCGTGAAATCAATCCGGAAATGGAGAATCGCCTGAGTGCCGTGCTTGCCGCAAGAGAAGCAGAAGGTCGCCAGATGGCCAGCCTCTTCGAACCGGATGTCCCGGAGGTTGTTTCCGGAGAAGACGTGGTTCAGGCTGAACAGCCACAACAGCCACAACAGCCACAACAGCCACAACAGCCGGTGTCTCCTGCCATCAACGATAAGAAGTCAGATTCAGGTGTGAATGTTCCGGCAGGGGGGATCGAGCAGGAGCTGAAAATGAAACCGGAAGAAGAGATGGAACAGCAACTGCCACCCGGGATCAGTGAATCCGGTGAAGTGGTGGATATGGCCGCTTATGAGGCATGGCAACAGGAAAATCATCCGGACATCCAGCAGCAGATGCAGCGTCGTGAAGAGGTGAACATTAATGTGCACCGGGAGCGCGGGGGGGATGTTGAGCCGGGAGATGATTTCTGA
PROTEIN sequence
Length: 727
MSFNAKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWVKISWQTFVNGCIYWWCTTLEGMRDLIRSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCGEQLWSAFVLASVVALVICLITFFVVSWILGHQGKQQSENEVTGGRQLTDNPKEVARMLKKSGEDSDIRIGDLPIIRDSEIKNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDNILNPLDARCVAWDLWKECLTQPDFDNVANTLIPMGTKEDPFWQGSGRTIFAEAAFLMRNDPNRSYSKLVDTLLSIKIEKLRTFLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDKKNGWLFISSNADTHASLKPVVSMWLSIAIRGLMAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKSAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQERPKVAPEFIPREINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVVQAEQPQQPQQPQQPQQPVSPAINDKKSDSGVNVPAGGIEQELKMKPEEEMEQQLPPGISESGEVVDMAAYEAWQQENHPDIQQQMQRREEVNINVHRERGGDVEPGDDF*