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NECEvent2014_8_6_scaffold_117_20

Organism: NECEvent2014_8_6_Escherichia_coli_51_30_partial

partial RP 28 / 55 MC: 5 BSCG 23 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: comp(22359..22736)

Top 3 Functional Annotations

Value Algorithm Source
Protein TrbF n=1 Tax=Escherichia coli H591 RepID=F4V9U5_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 95.9
  • Coverage: 97.0
  • Bit_score: 195
  • Evalue 3.40e-47
Protein TrbF {ECO:0000313|EMBL:EGI47875.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H591.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.9
  • Coverage: 97.0
  • Bit_score: 195
  • Evalue 4.70e-47
conjugal transfer protein TrbF similarity KEGG
DB: KEGG
  • Identity: 94.8
  • Coverage: 97.0
  • Bit_score: 192
  • Evalue 6.20e-47

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 378
ATGACAGCAAACAAAAAGAATCAGGAATTCAAAATCAGAAAAATTAGACGGAATATTGAGTATAGTTTCAGAGGTTCTGACAGATATTTTGATTTGTTTATTGTTTTCCTTGTTGCCGGAATTGTTTTATGGGCAGTTATGCACGTTATTTTCGATGTCTGTATTGATTCGTGGATGGCCGACCCGAAATTACTTAATTTCCAGTATATGTGGAATGTTCTGATGAAAGTCATTCCGTTTACGTTATGGACGCTGACAGCAGGGTTTCTTGTTACATTTTTTTCTGTCCCCAATGTGCGAATTAATATTCGGAAATATCATGATATTCCTGCTGAAACGCCGTATGCGCCGGGAGAACAATGTAAGGGAGGACAATAA
PROTEIN sequence
Length: 126
MTANKKNQEFKIRKIRRNIEYSFRGSDRYFDLFIVFLVAGIVLWAVMHVIFDVCIDSWMADPKLLNFQYMWNVLMKVIPFTLWTLTAGFLVTFFSVPNVRINIRKYHDIPAETPYAPGEQCKGGQ*