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NECEvent2014_8_6_scaffold_117_24

Organism: NECEvent2014_8_6_Escherichia_coli_51_30_partial

partial RP 28 / 55 MC: 5 BSCG 23 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: comp(23932..24675)

Top 3 Functional Annotations

Value Algorithm Source
Type-F conjugative transfer system pilin assembly protein TraF n=2 Tax=Escherichia coli RepID=F4V9V1_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 247.0
  • Bit_score: 507
  • Evalue 1.00e-140
  • rbh
Type-F conjugative transfer system pilin assembly protein TraF {ECO:0000313|EMBL:EGI47881.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 247.0
  • Bit_score: 507
  • Evalue 1.50e-140
traF; conjugative transfer protein similarity KEGG
DB: KEGG
  • Identity: 98.4
  • Coverage: 247.0
  • Bit_score: 500
  • Evalue 2.10e-139

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 744
ATGAATAAAGCATTACTGCCACTGTTACTCTGCTGCTTTATTTTTCCGGCGTCAGGGAAAGATGCAGGCTGGCAGTGGTATAACGAGAAAATAAATCCGAAGGAAAAAGAAAATCAACCCGCACCTGCAGTCCCCCGTCAGGAACCGGATATTATGCAGAAACTGGCCGTGCTGCAGACGGCAACAAAGCGGGCGTTGTATGAAGCCATTCTGTATCCCGGCGTGGATAATTTTGTGAAATATTTCCGTCTGCAGAATTACTGGACTCAGCAGGCCGGGCTTTTCACCATGAGCGCCAAAAAAGCCATGCTGGCGCATCCCGAACTGGACTATAACCTGCAGTACAGCCATTACAACGGCACGGTCCGGAACCAGTTGGCGGCAGACCAGGCGCAGCAACGACAGGCCATTGCGAAACTGGCTGAACACTACGGCATCATGTTCTTTTACCGGGGGCAGGACCCCATCGACGGGCAGCTGGCGCAGGTCATTAATGGCTTCAGGGATACCTATGGTCTGAGTGTTATTCCCGTTTCCGTGGATGGCGTGATTAATCCGCTGTTGCCGGATTCCCGGACTGACCAGGGGCAGGCGCAGCGCCTCGGCGTGAAATATTTCCCGGCCATGATGCTGGTTGACCCGAAACAGGGCAGTGTTCGTCCGTTATCATACGGTTTTATTTCGCAGGACGACCTGGCAAAACAGTTCCTGAACGTTTCTGAAGATTTTAAACCGAACTTCTGA
PROTEIN sequence
Length: 248
MNKALLPLLLCCFIFPASGKDAGWQWYNEKINPKEKENQPAPAVPRQEPDIMQKLAVLQTATKRALYEAILYPGVDNFVKYFRLQNYWTQQAGLFTMSAKKAMLAHPELDYNLQYSHYNGTVRNQLAADQAQQRQAIAKLAEHYGIMFFYRGQDPIDGQLAQVINGFRDTYGLSVIPVSVDGVINPLLPDSRTDQGQAQRLGVKYFPAMMLVDPKQGSVRPLSYGFISQDDLAKQFLNVSEDFKPNF*