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NECEvent2014_8_6_scaffold_117_30

Organism: NECEvent2014_8_6_Escherichia_coli_51_30_partial

partial RP 28 / 55 MC: 5 BSCG 23 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: comp(27615..28253)

Top 3 Functional Annotations

Value Algorithm Source
Type-F conjugative transfer system pilin assembly protein TrbC n=20 Tax=Escherichia coli RepID=M9E2R1_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 212.0
  • Bit_score: 418
  • Evalue 3.20e-114
  • rbh
Conjugal transfer pilus assembly protein TrbC {ECO:0000313|EMBL:EMD04199.1}; TaxID=1196033 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.6
  • Coverage: 212.0
  • Bit_score: 417
  • Evalue 1.30e-113
trbC; conjugal transfer protein TrbC similarity KEGG
DB: KEGG
  • Identity: 96.7
  • Coverage: 212.0
  • Bit_score: 406
  • Evalue 4.60e-111

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 639
ATGAACCGGAAAATATTTGCACTTTTTGCTCTGACAGCAGGGATGCATCTTGCTGTTCATGCTTCAGAAAATGTGAACACACCTGAAAACCGCCAGTTCCTGAAGCAGCAGGAAAATTTAAGCAGACAACTGCGAGAGAAACCTGACCATCAGCTGAAAGCCTGGGCGGAGAAACAGGTGCTGGAAAACCCTCTTCAGCGTTCAGATAACCATTTTCTGGATGAGCTGGTTCGTAAACAGCAGGCTTCGCAGGACGGGAAACCCCGGCAGGGTGCCCTGTATTTTGTGTCGTTTTCCATTCCCGAAGAGGGGCTGAAACGGATGCTGGGCGAAACCCGGCACTACGGTATACCCGCCACACTGCGGGGCATGGTGAACAATGACCTGAAGACCACCGCTGAAGCCGTGCTGTCCCTGGTGAAAGACGGCGCGACTGATGGTGTTCAGATCGACCCGACGCTGTTTTCACAGTACGGCATTCGCAGTGTACCGGCACTGGTGGTGTTCTGCAGTCAGGGATACGACATCATCCGGGGAAACCTGCGGGTCGGCCAGGCGCTGGAGAAAGTGGCCGCCACGGGTGACTGCCGGCAGGTGGCCCGGACGTTGCTGAATAACCCCGGAGATAAACAAAAATGA
PROTEIN sequence
Length: 213
MNRKIFALFALTAGMHLAVHASENVNTPENRQFLKQQENLSRQLREKPDHQLKAWAEKQVLENPLQRSDNHFLDELVRKQQASQDGKPRQGALYFVSFSIPEEGLKRMLGETRHYGIPATLRGMVNNDLKTTAEAVLSLVKDGATDGVQIDPTLFSQYGIRSVPALVVFCSQGYDIIRGNLRVGQALEKVAATGDCRQVARTLLNNPGDKQK*