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NECEvent2014_4_3_scaffold_215

Alias: 174_003_scaffold_215

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_3_scaffold_215_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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207..563
DNA (357bp) protein (119aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=H7CSE4_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80069.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_4_3_scaffold_215_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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872..1669
DNA (798bp) protein (266aa)
Oxidoreductase, short chain dehydrogenase/reductase family n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R4C6_CLOPF rbh
Oxidoreductase, short chain dehydrogenase/reductase family {ECO:0000313|EMBL:EDT25059.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="
dehydrogenase
NECEvent2014_4_3_scaffold_215_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1844..3379
DNA (1536bp) protein (512aa)
Cardiolipin synthetase n=3 Tax=Clostridium perfringens RepID=H7CSE6_CLOPF rbh
Cardiolipin synthetase {ECO:0000313|EMBL:EIA18468.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
clsB; cardiolipin synthetase
NECEvent2014_4_3_scaffold_215_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3581..3739)
DNA (159bp) protein (53aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=H7CSE7_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA18469.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_4_3_scaffold_215_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4006..5568
DNA (1563bp) protein (521aa)
GntR family transcriptional regulator n=2 Tax=Clostridium perfringens RepID=H7CSE8_CLOPF rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:EIA18470.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringe
GntR family transcriptional regulator
NECEvent2014_4_3_scaffold_215_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5870..7237
DNA (1368bp) protein (456aa)
rumA; 23S rRNA (uracil-5-)-methyltransferase RumA (EC:2.1.1.-)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Clostridium perfringens F262 RepID=H7CSE9_CLOPF rbh
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EIA18471.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium per
NECEvent2014_4_3_scaffold_215_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8049..8906)
DNA (858bp) protein (286aa)
Transcriptional regulator, AraC family n=2 Tax=Clostridium perfringens RepID=B1BNT9_CLOPF rbh
transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDT16677.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfring
NECEvent2014_4_3_scaffold_215_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9095..10363
DNA (1269bp) protein (423aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q8XNG2_CLOPE rbh
hypothetical protein
Bacterial extracellular solute-binding protein {ECO:0000313|EMBL:EDT24979.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
NECEvent2014_4_3_scaffold_215_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10437..11363
DNA (927bp) protein (309aa)
ABC-type sugar transport system, permease component n=3 Tax=Clostridium perfringens RepID=B1R4B4_CLOPF rbh
ABC transporter
Probable ABC transporter {ECO:0000313|EMBL:BAB80078.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_4_3_scaffold_215_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11380..12207
DNA (828bp) protein (276aa)
ABC-type sugar transport system, permease component n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RP12_CLOPF rbh
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:EDT16688.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostri
suger ABC transporter
NECEvent2014_4_3_scaffold_215_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12235..14442
DNA (2208bp) protein (736aa)
Alpha-galactosidase AgaN n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BNT5_CLOPF rbh
Alpha-galactosidase AgaN {ECO:0000313|EMBL:EDT16774.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS
aga; alpha-galactosidase
NECEvent2014_4_3_scaffold_215_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14481..17018
DNA (2538bp) protein (846aa)
Endo-beta-galactosidase C n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BNT4_CLOPF rbh
Endo-beta-galactosidase C {ECO:0000313|EMBL:EDT16660.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JG
endo-beta-galactosidase C
NECEvent2014_4_3_scaffold_215_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17219..17770
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R4B1_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT25146.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC
hypothetical protein
NECEvent2014_4_3_scaffold_215_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17889..18467
DNA (579bp) protein (193aa)
TetR family transcriptional regulator n=4 Tax=Clostridium perfringens RepID=H7CSF5_CLOPF rbh
TetR family transcriptional regulator
Probable transcriptional regulator {ECO:0000313|EMBL:BAB80083.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
NECEvent2014_4_3_scaffold_215_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18817..20610
DNA (1794bp) protein (598aa)
Myosin-cross-reactive antigen n=6 Tax=Clostridium perfringens RepID=H7CSF6_CLOPF rbh
Probable myosin-crossreactive antigen {ECO:0000313|EMBL:BAB80084.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringe
hypothetical protein
Displaying 15 items

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