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NECEvent2014_4_3_scaffold_227

Alias: 174_003_scaffold_227

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_3_scaffold_227_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..753)
DNA (753bp) protein (251aa)
Putative pilus biogenesis protein n=2 Tax=Clostridium perfringens RepID=Q0TPB3_CLOP1 rbh
pilus biogenesis protein
Putative pilus biogenesis protein {ECO:0000313|EMBL:EDT23281.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B
NECEvent2014_4_3_scaffold_227_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(853..1884)
DNA (1032bp) protein (344aa)
Putative lipoprotein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V3U1_CLOPF rbh
Putative lipoprotein {ECO:0000313|EMBL:EDT71523.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721
hypothetical protein
NECEvent2014_4_3_scaffold_227_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1901..2719)
DNA (819bp) protein (273aa)
dapF; diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:000
Diaminopimelate epimerase n=4 Tax=Clostridium perfringens RepID=H7CXP0_CLOPF rbh
NECEvent2014_4_3_scaffold_227_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2811..4538
DNA (1728bp) protein (576aa)
Fibronectin-binding protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R8W3_CLOPF rbh
Fibronectin-binding protein {ECO:0000313|EMBL:EDT23333.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str.
fibronectin-binding protein
NECEvent2014_4_3_scaffold_227_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4649..5776)
DNA (1128bp) protein (376aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=Q8XJB3_CLOPE rbh
methyltransferase
Uncharacterized protein {ECO:0000313|EMBL:BAB81554.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_4_3_scaffold_227_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5796..6332)
DNA (537bp) protein (179aa)
pyrR; bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase (EC:2.4.2.9)
Bifunctional protein PyrR n=11 Tax=Clostridium perfringens RepID=PYRR_CLOP1 rbh
Bifunctional protein PyrR {ECO:0000256|HAMAP-Rule:MF_01219}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.
NECEvent2014_4_3_scaffold_227_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6336..7256)
DNA (921bp) protein (307aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium
Pseudouridine synthase n=6 Tax=Clostridium perfringens RepID=H7CXP4_CLOPF rbh
RluA family pseudouridine synthase
NECEvent2014_4_3_scaffold_227_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7394..8020)
DNA (627bp) protein (209aa)
Cell-division initiation protein DivIVA n=8 Tax=Clostridium perfringens RepID=H7CXP5_CLOPF rbh
cell division protein DivIVA
Cell-division initiation protein DivIVA {ECO:0000313|EMBL:EIA16700.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfrin
NECEvent2014_4_3_scaffold_227_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8033..8794)
DNA (762bp) protein (254aa)
S4 domain-containing protein n=4 Tax=Clostridium perfringens RepID=H7CXP6_CLOPF rbh
S4 domain-containing protein
S4 domain-containing protein {ECO:0000313|EMBL:EIA16701.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;
NECEvent2014_4_3_scaffold_227_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8796..9245)
DNA (450bp) protein (150aa)
Cell division protein SepF n=10 Tax=Clostridium perfringens RepID=SEPF_CLOP1
hypothetical protein
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262
NECEvent2014_4_3_scaffold_227_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9264..9923)
DNA (660bp) protein (220aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=H7CXP8_CLOPF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15109.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
NECEvent2014_4_3_scaffold_227_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10023..10754)
DNA (732bp) protein (244aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=H7CXP9_CLOPF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15079.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
NECEvent2014_4_3_scaffold_227_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10767..11105)
DNA (339bp) protein (113aa)
Small basic protein n=10 Tax=Clostridium perfringens RepID=H7CXQ0_CLOPF
sbp; small basic protein
Small basic protein {ECO:0000313|EMBL:EDT25558.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.
NECEvent2014_4_3_scaffold_227_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11118..11834)
DNA (717bp) protein (239aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CXQ2_CLOPF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA16707.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_4_3_scaffold_227_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11848..12594)
DNA (747bp) protein (249aa)
Cell division protein FtsQ n=6 Tax=Clostridium perfringens RepID=H7CXQ3_CLOPF rbh
cell division protein FtsQ
Uncharacterized protein {ECO:0000313|EMBL:BAB81564.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_4_3_scaffold_227_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12752..13876)
DNA (1125bp) protein (375aa)
Stage V sporulation protein E n=8 Tax=Clostridium perfringens RepID=H7CXQ4_CLOPF rbh
spoVE; stage V sporulation protein E
Stage V sporulation protein E {ECO:0000313|EMBL:EIA16709.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.
NECEvent2014_4_3_scaffold_227_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13904..14875)
DNA (972bp) protein (324aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=9 Tax=Clostridium perfringens RepID=MRAY_CLOP1 rbh
NECEvent2014_4_3_scaffold_227_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14925..16286)
DNA (1362bp) protein (454aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostr
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BJ00_CLOPF rbh
murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
NECEvent2014_4_3_scaffold_227_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16299..17753)
DNA (1455bp) protein (485aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule
murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RKF9_CLOPF rbh
NECEvent2014_4_3_scaffold_227_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17848..20064)
DNA (2217bp) protein (739aa)
Stage V sporulation protein D n=2 Tax=Clostridium perfringens RepID=B1R8U7_CLOPF rbh
Stage V sporulation protein D {ECO:0000313|EMBL:EDT23323.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str
spoVD; stage V sporulation protein D
Displaying 20 items

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