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NECEvent2014_4_3_scaffold_396

Alias: 174_003_scaffold_396

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_3_scaffold_396_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..140
DNA (138bp) protein (46aa)
lysS; lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|H
Lysine--tRNA ligase n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=SYK_CLOPS
NECEvent2014_4_3_scaffold_396_trna_1
unknown

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295..366
DNA (72bp)
transferRNA
NECEvent2014_4_3_scaffold_396_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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827..2230
DNA (1404bp) protein (468aa)
glyS; glycyl-tRNA synthetase (EC:6.1.1.14)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:000025
Glycine--tRNA ligase n=10 Tax=Clostridium perfringens RepID=SYG_CLOPE rbh
NECEvent2014_4_3_scaffold_396_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2419..3537
DNA (1119bp) protein (373aa)
Peptidase n=5 Tax=Clostridium perfringens RepID=H7CZG8_CLOPF rbh
pepT; peptidase
Peptidase {ECO:0000313|EMBL:EIA15919.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_4_3_scaffold_396_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3717..4586
DNA (870bp) protein (290aa)
LD-carboxypeptidase family protein n=1 Tax=Clostridium perfringens F262 RepID=H7CZG7_CLOPF rbh
LD-carboxypeptidase family protein {ECO:0000313|EMBL:EIA15918.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
mccF; LD-carboxypeptidase
NECEvent2014_4_3_scaffold_396_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4678..5919
DNA (1242bp) protein (414aa)
Pyridine nucleotide-disulphide oxidoreductase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RTH7_CLOPF rbh
oxidoreductase
Probable glutamate synthase small chain {ECO:0000313|EMBL:BAB82167.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfrin
NECEvent2014_4_3_scaffold_396_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6161..7204)
DNA (1044bp) protein (348aa)
biotin synthase (EC:2.8.1.6)
Biotin synthase n=9 Tax=Clostridium perfringens RepID=H7CZG5_CLOPF rbh
Radical SAM domain protein {ECO:0000313|EMBL:EDS80802.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. J
NECEvent2014_4_3_scaffold_396_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7515..8891
DNA (1377bp) protein (459aa)
murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase (EC:6.3.2.9)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutam
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=2 Tax=Clostridium perfringens RepID=MURD_CLOP1 rbh
Displaying 8 items

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