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NECEvent2014_4_4_scaffold_70_14

Organism: NECEvent2014_4_4_Clostridium_perfringens_27_15

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(19721..20080)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L20 n=10 Tax=Clostridium perfringens RepID=RL20_CLOP1 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 119.0
  • Bit_score: 235
  • Evalue 3.70e-59
rplT; 50S ribosomal protein L20 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 119.0
  • Bit_score: 235
  • Evalue 1.00e-59
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 119.0
  • Bit_score: 235
  • Evalue 5.10e-59

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 360
ATGGCAAGAGTTAAGAGAGCGGTAAATGCTCGTAAAAATCATAAAAAAGTTTTAAAACTTGCAAAAGGATACTATGGTGGAAAAAGCAAGTTATTCAAAACTGCTAACGAATCAGTAATAAGAGCATTAAGAAATGCTTACGTTGGAAGAAGATTAAAGAAGAGAGACTACAGAAGATTATGGATAGCTAGAATAAACGCAGCTACAAGAATGAACGGTCTTTCATATTCAAGATTCATGAACGGAATGAAATTAGCTGGTGTTGATATAAACAGAAAAATGCTTTCAGAGATAGCTATAAATGATCCAAAAGCATTTGCTGATTTAGTTGAATTAGCTAAAAAGCACTTAAACGCTTAA
PROTEIN sequence
Length: 120
MARVKRAVNARKNHKKVLKLAKGYYGGKSKLFKTANESVIRALRNAYVGRRLKKRDYRRLWIARINAATRMNGLSYSRFMNGMKLAGVDINRKMLSEIAINDPKAFADLVELAKKHLNA*