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NECEvent2014_4_4_scaffold_82_12

Organism: NECEvent2014_4_4_Clostridium_perfringens_27_15

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: 17308..18861

Top 3 Functional Annotations

Value Algorithm Source
Glycine betaine/L-proline ABC transporter, permease/glycine betaine/L-proline-binding protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TTP8_CLOP1 similarity UNIREF
DB: UNIREF100
  • Identity: 99.0
  • Coverage: 517.0
  • Bit_score: 984
  • Evalue 3.50e-284
  • rbh
glycine betaine/L-proline ABC transporter permease/glycine betaine/L-proline-binding protein similarity KEGG
DB: KEGG
  • Identity: 98.8
  • Coverage: 517.0
  • Bit_score: 983
  • Evalue 2.20e-284
Glycine betaine/carnitine/choline ABC transporter, permease/substrate-binding protein {ECO:0000313|EMBL:ABG87678.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiace similarity UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 517.0
  • Bit_score: 982
  • Evalue 2.50e-283

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1554
TTGAATAATTTATTACAATATGTAATTTCACAGAAAACTCAAATATTAGATTTATTAGTTCAACATATATATTTAACAATTACGGCTATAGGAATAGCTATATTAATAGGAGTTCCTTTAGGAATTCTTGTTTCAAGGGTCAAGTTTTTAAGAAAGCCTATACTAGGATTTGTAAACTTAGTACAAGCTGTGCCTTCTATGGCCTTACTAGGATTGCTTATTCCCATATTAGGAATAGGAAGTACACCTGCAATCTTTATGGTTGTAGTATATTCATTGCTTCCAATAGTTAAAAATACTTACACAGGAATCTCTGGCATAGACCCAGTAGTATTAGAATCTGCTAAGGGAATTGGACTTACTAAGAACCAAAGTTTATTTAAGATACAATTACCATTAGCATTGCCAATAATAATGTCTGGTATAAGAATATCAGCAGTTACAGCCGTAGGGCTTATGACTTTAGCAGCCTTTATTGGTGCCGGTGGACTTGGATACTTAGTATTCTCAGGAGTTCAAACGGTAAATAATAATATGATTTTAGCAGGAGCTATACCAGCTTGTATTTTAGCCTTAATAGTTGACTTTATTTTTGGAAAAATAGAGGTAGCTGTTACACCAAAGGGATTAAGTAATGATAAGAAAAAGAAAAATACTTTTGTTCTTAAAATAATAAGTGTAATAATGATAATAGCTATTTTATTTATGGGAATTTCATCATTTATATCAAGTAAAAAAGATAAAGTGGTTATTGGATCAAAAAACTTTACAGAGCAACTTATTTTAGGAAATATGTATGCAGATTTAGTTCAGGATAAAACAGATTTACAAGTTGAAAAAAAGTTAAATCTAGGAGGAACATCAGTTGCCTTTGGAGCACTTGAAAAAGGTGATGTTGACATGTATGTTGATTATACTGGAACATTACTTGTTAATGTTATGAAAGAAAATAATATTGATAATAGTGTAGATTATTATAATAGCATAAAAGAAAATATGAACAAGGAACATGGGTTAACAGTAATGGAACCCCTAGGTTTTAATAATACTTATAATATAGCTATATCAAAAGAATTAGCTGATAAGTATAAGATAAATACCATATCAGATTTATCAAAGTACAGTAATGACTTTGTATTATCTCCAACTATTGAGTTCCAAAATAGACAAGATGGTTTAGTTGGATTAAAGAATTACTATGGCATGGATTTCAAAAATGTTAAATCTTTAGATGGAAGTCTTAGATACTCAGCATTATCAAATGGGGAATCACAGGCTATAGATGCTTTCTCAACAGATGGACTTCTTAAAAAGTTTGATTTAAAAACTTTAGAAGATGATAAGAAATTCTTTGTAAATTATAGTGCAGTACCTATAGTTAACAATAAGACTTTAGAAAAATATCCACAATTAAAGGAGATTTTAAACTCTTTAAGTGGTAAAATCAATGAAGAAAAAATGATTGACTTAAACTATGAAGTAGATGTATTAGGTAAATCACCAGAAGAGGTTGCTAAAGCTTTCTTAATTAGAGAAGGTTTAATAGAACAATAG
PROTEIN sequence
Length: 518
LNNLLQYVISQKTQILDLLVQHIYLTITAIGIAILIGVPLGILVSRVKFLRKPILGFVNLVQAVPSMALLGLLIPILGIGSTPAIFMVVVYSLLPIVKNTYTGISGIDPVVLESAKGIGLTKNQSLFKIQLPLALPIIMSGIRISAVTAVGLMTLAAFIGAGGLGYLVFSGVQTVNNNMILAGAIPACILALIVDFIFGKIEVAVTPKGLSNDKKKKNTFVLKIISVIMIIAILFMGISSFISSKKDKVVIGSKNFTEQLILGNMYADLVQDKTDLQVEKKLNLGGTSVAFGALEKGDVDMYVDYTGTLLVNVMKENNIDNSVDYYNSIKENMNKEHGLTVMEPLGFNNTYNIAISKELADKYKINTISDLSKYSNDFVLSPTIEFQNRQDGLVGLKNYYGMDFKNVKSLDGSLRYSALSNGESQAIDAFSTDGLLKKFDLKTLEDDKKFFVNYSAVPIVNNKTLEKYPQLKEILNSLSGKINEEKMIDLNYEVDVLGKSPEEVAKAFLIREGLIEQ*