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NECEvent2014_4_5_scaffold_394

Alias: 174_005_scaffold_394

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_5_scaffold_394_trna_1
unknown

Not on your lists

8..79
DNA (72bp)
transferRNA
NECEvent2014_4_5_scaffold_394_trna_2
unknown

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135..207
DNA (73bp)
transferRNA
NECEvent2014_4_5_scaffold_394_trna_3
unknown

Not on your lists

217..290
DNA (74bp)
transferRNA
NECEvent2014_4_5_scaffold_394_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(446..1429)
DNA (984bp) protein (328aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=R0A1A2_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ30243.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
DNA replication protein
NECEvent2014_4_5_scaffold_394_2
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1419..2411)
DNA (993bp) protein (331aa)
Primosome, DnaD subunit n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J5D9_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ85058.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
DnaD-like protein
NECEvent2014_4_5_scaffold_394_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2618..3823)
DNA (1206bp) protein (402aa)
Subtilase family protein n=3 Tax=Clostridium butyricum RepID=B1QTH3_CLOBU rbh
Peptidase S8 and S53, subtilisin, kexin, sedolisin {ECO:0000313|EMBL:EEP52435.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostrid
peptidase S8/S53 subtilisin kexin sedolisin
NECEvent2014_4_5_scaffold_394_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3901..4716)
DNA (816bp) protein (272aa)
Beta-lactamase domain protein n=2 Tax=Clostridium butyricum RepID=M8K103_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ30246.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
fold6; putative Zn-dependent hydrolase of the beta-lactamase Fold protein
NECEvent2014_4_5_scaffold_394_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4733..5164)
DNA (432bp) protein (144aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QTH1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30247.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_4_5_scaffold_394_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5316..5789)
DNA (474bp) protein (158aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QTH0_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ30248.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_4_5_scaffold_394_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6009..6548)
DNA (540bp) protein (180aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8J5E3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ30249.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_4_5_scaffold_394_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7018..8283
DNA (1266bp) protein (422aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylp
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=4 Tax=Clostridium butyricum RepID=B1QTG8_CLOBU rbh
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
NECEvent2014_4_5_scaffold_394_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8310..9101
DNA (792bp) protein (264aa)
yycJ; putative metallo-hydrolase YycJ (EC:3.-.-.-)
Beta-lactamase domain protein n=2 Tax=Clostridium butyricum RepID=M8K105_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ30251.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_4_5_scaffold_394_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9159..9662
DNA (504bp) protein (168aa)
SEC-C domain protein n=4 Tax=Clostridium butyricum RepID=B1QTG6_CLOBU rbh
Protein export cytoplasm protein SecA ATPase RNA helicase {ECO:0000313|EMBL:KJZ85641.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="
hypothetical protein
NECEvent2014_4_5_scaffold_394_11
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9870..10349
DNA (480bp) protein (160aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methy
UPI0003D658AB related cluster n=2 Tax=unknown RepID=UPI0003D658AB rbh
rRNA large subunit methyltransferase
NECEvent2014_4_5_scaffold_394_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10459..10962
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ABX2_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ30254.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_4_5_scaffold_394_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11357..11980
DNA (624bp) protein (208aa)
TIGR00153 family protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YS73_CLOBU rbh
TIGR00153 family protein {ECO:0000313|EMBL:ENZ30255.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_4_5_scaffold_394_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11973..12971
DNA (999bp) protein (333aa)
Phosphate transporter n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K111_CLOBU rbh
Putative low-affinity inorganic phosphate transporter {ECO:0000313|EMBL:KJZ85648.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clos
phosphate permease
NECEvent2014_4_5_scaffold_394_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13187..13525
DNA (339bp) protein (113aa)
Alkylphosphonate utilization operon protein PhnA n=4 Tax=Clostridium butyricum RepID=B1QTG0_CLOBU
Alkylphosphonate utilization protein {ECO:0000313|EMBL:KHD13392.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
phnA family protein
NECEvent2014_4_5_scaffold_394_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13597..13938
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JFP4_CLOBU
No significant {ECO:0000313|EMBL:KJZ85654.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_4_5_scaffold_394_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14205..14936
DNA (732bp) protein (244aa)
Transferase hexapeptide repeat containing protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J5F2_CLOBU rbh
Transferase {ECO:0000313|EMBL:KHD13403.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hexapeptide repeat-containing transferase
NECEvent2014_4_5_scaffold_394_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15144..15326
DNA (183bp) protein (61aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QTF7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30260.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_4_5_scaffold_394_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15517..16476
DNA (960bp) protein (320aa)
Methyltransferase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K116_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ30261.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
DNA methylase N-4/N-6 domain protein
NECEvent2014_4_5_scaffold_394_20
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16730..17053
DNA (324bp) protein (108aa)
phosphotransferase system cellobiose-specific component IIA (EC:2.7.1.69)
Lichenan-specific phosphotransferase enzyme iia component n=4 Tax=Clostridium butyricum RepID=B1QTF5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ95304.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
NECEvent2014_4_5_scaffold_394_21
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17120..17425
DNA (306bp) protein (102aa)
PTS system, cellobiose-specific IIB component {ECO:0000313|EMBL:KJZ85656.1}; EC=2.7.1.69 {ECO:0000313|EMBL:KJZ85656.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostri
celA5; cellobiose-specific phosphotransferase enzyme IIB component CelA (EC:2.7.1.69)
Lichenan-specific phosphotransferase enzyme iib component n=4 Tax=Clostridium butyricum RepID=B1QTF4_CLOBU
NECEvent2014_4_5_scaffold_394_22
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17598..18908
DNA (1311bp) protein (437aa)
Lichenan permease iic component n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J5F6_CLOBU rbh
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
PTS system lactose/cellobiose family transporter subunit IIC
Displaying 25 items

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