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NECEvent2014_4_5_scaffold_200_3

Organism: NECEvent2014_4_5_Clostridium_butyricum_28_20

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 15 / 38 MC: 1
Location: comp(988..1812)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=4 Tax=Clostridium butyricum RepID=B1QYS1_CLOBU similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 257.0
  • Bit_score: 501
  • Evalue 6.30e-139
  • rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 257.0
  • Bit_score: 501
  • Evalue 8.80e-139
sigG; RNA polymerase sigma-G factor SigG similarity KEGG
DB: KEGG
  • Identity: 96.9
  • Coverage: 257.0
  • Bit_score: 490
  • Evalue 4.10e-136

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Taxonomy

Clostridium butyricum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 825
ATGATAATTAATAAAGTAGAAATATGTGGTGTTAATACTTCAAAACTTCCAATACTTAAGGAAAAAGAAAAAAAACAACTTCTTCTACAAATGAAAGCTGGAGATAAAAGTGCAAGAGAAACATTTATAAAGGGAAATTTAAGATTAGTCTTAAGTGTTATTCAACGCTTTAACAATAGAGGTGAAAATATTGATGATTTATTTCAAGTAGGTTGCATAGGCTTAATGAAATCAATCGATAATTTTGATTTATCCCAAAATGTTAAATTTTCAACTTATGCAGTTCCAATGATAATAGGAGAAATACGAAGATATTTAAGAGATAATAACTCTATAAGAGTAAGTAGATCATTGAGAGACATTGCATATAAAGCATTAATTGTTAGAGAAAAGTTTATTAAAGACAATAACAAGGAACCAACAATTTCACAAATAGCAAAGGAACTTGAATTGCCAAGAGAAGAAGTTGTCTTTGCTTTAGATGCTATACAAGATCCTGTATCTTTATATGAGCCTATTTATCATGATGGTGGAGATGCAATATATGTAATGGATCAAATTAGTGACTCAAAAGATACGGATGAGAATTGGCTTGAAAACATTTCCATAAAAGAAGCTATGAAAAAGCTAAGCGATCGTGAAAAATTAATTTTAAATTTAAGATTTTTTAATGGAAGAACTCAAATGGAAGTTGCTGATGAGATTGGTATTTCACAAGCTCAAGTTTCAAGATTAGAAAAAACAGCGCTAAAACATATGCGTAAACATGTATGACAAAAAAACTGGTGTTATTATAATGCCAGTTTTTATAAATTTGTGATTTAA
PROTEIN sequence
Length: 275
MIINKVEICGVNTSKLPILKEKEKKQLLLQMKAGDKSARETFIKGNLRLVLSVIQRFNNRGENIDDLFQVGCIGLMKSIDNFDLSQNVKFSTYAVPMIIGEIRRYLRDNNSIRVSRSLRDIAYKALIVREKFIKDNNKEPTISQIAKELELPREEVVFALDAIQDPVSLYEPIYHDGGDAIYVMDQISDSKDTDENWLENISIKEAMKKLSDREKLILNLRFFNGRTQMEVADEIGISQAQVSRLEKTALKHMRKHV*QKNWCYYNASFYKFVI*