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NECEvent2014_4_5_scaffold_161_27

Organism: NECEvent2014_4_5_Clostridium_7_2_43FAA-rel_28_9

near complete RP 50 / 55 MC: 5 BSCG 50 / 51 MC: 3 ASCG 16 / 38 MC: 2
Location: comp(34298..35206)

Top 3 Functional Annotations

Value Algorithm Source
LysR substrate binding domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QJT6_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 79.7
  • Coverage: 296.0
  • Bit_score: 485
  • Evalue 3.90e-134
  • rbh
LysR substrate binding domain protein {ECO:0000313|EMBL:EKY28211.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum D similarity UNIPROT
DB: UniProtKB
  • Identity: 79.7
  • Coverage: 296.0
  • Bit_score: 485
  • Evalue 5.50e-134
HTH-type transcriptional regulator gltC similarity KEGG
DB: KEGG
  • Identity: 63.8
  • Coverage: 301.0
  • Bit_score: 394
  • Evalue 3.40e-107

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Taxonomy

Clostridium celatum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 909
ATGAACTTAAATCACTTAAATTATTTTAGAGTATTAGCAAAGCTTGAGCATTATACTCAAGCAGCAGATAAATTATCAATAACCCAACCTAGCTTAAGTCATGCTATGTCAGCATTAGAAAAAGATTTGGGGACATATTTGTTTGAAAAGCAAGGAAGGAATATAAAGCTAACTAAATATGGAAAGATATATTTTGAATATGTAGATAGAGCATTAAGTGAATTAGAAAAAGGAGAAAAGAAATTAAGAGAATTAACTAATATTTCATCAGGTACTATTGAGTTAGGATATATATACACACTTGGCCCTACTTTTGTACCCAAATTAATTAAAAGGTTTGTAACAATGGGTGAAAATCAAGATATAAAGTTTTTATTTGGGCAAGGAACAACAAAATCTCTTATAGAAGATTTAAAAAATGAAAAATTTGATATGGTTCTTTGTTCATATGTTGAAAATGAAGATGAAGTAGATTTTATACCAATAGAAAATGAAGAGTTAGTCGTAATTGTAGCCAATGAACATCCTTTAGCTAAAAATGAGTCTATTGATTTAAGAGAGTTAGATAATTATCCATTTATAGGTTTTAGTGAGAAAAGTGGTATAAGATCATTAATAAATGGATTATTTGAAAGAGTAAATATAATACCTAATATAATATGTGAGGTTGAAGAAGATAACGCAGTTGCAGGGTTAGTAGAGATAAATTATGGAATTGCCGTTGTTCCAAAGATATCGTCATTAAAGAACTATAATATCAAGGTTCTTCCAATAATAAATCCAACACATGAAAGGTTTATATATCTTGCAACTTTAAAGAATAGATATTTAATACCTTCAGCTAGTTTATTTAAAAATTTTATTATCGAGCAAAGTAAAGATAAATTTTTAGAGAGTAAAAAAATATAA
PROTEIN sequence
Length: 303
MNLNHLNYFRVLAKLEHYTQAADKLSITQPSLSHAMSALEKDLGTYLFEKQGRNIKLTKYGKIYFEYVDRALSELEKGEKKLRELTNISSGTIELGYIYTLGPTFVPKLIKRFVTMGENQDIKFLFGQGTTKSLIEDLKNEKFDMVLCSYVENEDEVDFIPIENEELVVIVANEHPLAKNESIDLRELDNYPFIGFSEKSGIRSLINGLFERVNIIPNIICEVEEDNAVAGLVEINYGIAVVPKISSLKNYNIKVLPIINPTHERFIYLATLKNRYLIPSASLFKNFIIEQSKDKFLESKKI*