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NECEvent2014_4_5_scaffold_163_6

Organism: NECEvent2014_4_5_Veillonella_parvula-rel_38_17_partial

partial RP 6 / 55 MC: 1 BSCG 6 / 51 MC: 2 ASCG 6 / 38 MC: 1
Location: comp(4129..5292)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=2 Tax=Veillonella RepID=J5AR64_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 97.2
  • Coverage: 388.0
  • Bit_score: 726
  • Evalue 1.70e-206
  • rbh
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. similarity UNIPROT
DB: UniProtKB
  • Identity: 96.9
  • Coverage: 388.0
  • Bit_score: 724
  • Evalue 6.90e-206
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 91.2
  • Coverage: 387.0
  • Bit_score: 673
  • Evalue 3.70e-191

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Taxonomy

Veillonella sp. HPA0037 → Veillonella → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1164
GTGGCTAAGAAAGAACAAAAAAGTCAAATAGAGGAGATTGTTGCACAACTTCTTGAAAAAGGCCGTAAAAGCGGTGTGTTGACACAATCGGAAATTTCAGATGCTCTTCATGAGCAAACTGATTTAACAGCAGAACAATTGGATGATATTTATGTTACTTTTAACAAATTAAACATCGAAGTTGTTCCAGATGTTGATGACGAAGATAAAGACGATGCCCTCGAACCTGAACCTGATGATGAAGATGTTGAAGGCGCATCAGAAAAACATATATCCATAGATTTAAGTGTGGATGCTAGCGTTAATATCGACGACCCAGTTCGCATGTATTTGAAAGAAATTGGTCGTGTTCCATTGTTATCCGCCGATGAAGAAATTGTTTTAGCAAAACAAATCGAAGCTGGGGCAGCAGAGGATGCTACATATAAAGAAATACAGCTTAGCAAGAAGGCTAAGAAGAAATTGGTAGATGCTAACTTGCGCCTAGTTGTAAGTATTGCTAAACGTTATGTTGGTAGAGGCATGTTATTCTTGGACTTGATTCAAGAAGGTAATTTAGGCCTTATCAAAGCGGTAGATAAATTCGATTACACAAAAGGCTATAAATTTTCCACTTATGCAACATGGTGGATTCGTCAAGCGATTACACGGGCCATTGCTGACCAAGCAAGAACAATACGTATTCCAGTTCATATGGTTGAAACAATCAATAAATTGATTCGTATTTCTCGACAATTATTGCAAGATAAAGGTAGAGAACCTACGCCGGAAGAAATTGCAGAAGGCATGGGCATTACTGCAGAACGTGTTCGTGAAATTCAAAAAATTGCACAAGAGCCTGTATCCTTGGAAACACCAATCGGTGAAGAAGAAGACTCCCACTTGGGTGATTTTATCGAAGACCAAGATGCGGTGGCACCAGATGATGCGGCTAGCTACATCTTGTTGCAAGAACAAATCGAAGACGTATTTACATGCTTAACTGATCGTGAGCAACAAGTATTGATTTTACGTTTTGGTTTGAAAGATGGTAAACCACGTACACTTGAAGAAGTAGGTCAACACTTTAATGTAACACGTGAACGTATTCGTCAAATCGAAGGTAAAGCGTTAACGAAATTACGCAATCGTGGAAAACGCGATAAAATTAAAGATTTCTTATAA
PROTEIN sequence
Length: 388
VAKKEQKSQIEEIVAQLLEKGRKSGVLTQSEISDALHEQTDLTAEQLDDIYVTFNKLNIEVVPDVDDEDKDDALEPEPDDEDVEGASEKHISIDLSVDASVNIDDPVRMYLKEIGRVPLLSADEEIVLAKQIEAGAAEDATYKEIQLSKKAKKKLVDANLRLVVSIAKRYVGRGMLFLDLIQEGNLGLIKAVDKFDYTKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRISRQLLQDKGREPTPEEIAEGMGITAERVREIQKIAQEPVSLETPIGEEEDSHLGDFIEDQDAVAPDDAASYILLQEQIEDVFTCLTDREQQVLILRFGLKDGKPRTLEEVGQHFNVTRERIRQIEGKALTKLRNRGKRDKIKDFL*