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NECEvent2014_5_3_scaffold_7_3

Organism: NECEvent2014_5_3_Clostridium_paraputrificum_30_27

near complete RP 50 / 55 MC: 2 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: comp(1267..2109)

Top 3 Functional Annotations

Value Algorithm Source
Ribosome biogenesis GTPase A n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QG79_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 84.5
  • Coverage: 278.0
  • Bit_score: 474
  • Evalue 8.40e-131
  • rbh
ylqF; ribosome biogenesis GTP-binding protein YlqF similarity KEGG
DB: KEGG
  • Identity: 83.2
  • Coverage: 280.0
  • Bit_score: 477
  • Evalue 2.10e-132
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.2
  • Coverage: 280.0
  • Bit_score: 477
  • Evalue 1.10e-131

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Taxonomy

Clostridium baratii → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 843
ATGGCAATAAATTGGTTTCCAGGTCATATGAAAAAGACTCAAAGAGAAATAAAAGAAAATTTAAAGTTAGTTGATGCTGTTATAGAAATAAGGGATGCTAGAATTCCTAGAAGTTCAGCAAATCCAGATATAGATAAATTGGTGGGAGATAAGCCAAGAATAATTTTATTAAACAAGAGTGATTTAACAGAAAAGAGTGTTACAAAGCAATGGATTAAACACTTATCCTCTGAAAATGTTAAGGTACTTGAAGTTAATTGTTTAACTGGAAGTGGTCTTAATGCAATTAAGCCTGCAATTCTGGAGTTATTAAAAGAAAAGCATGATAGATTAAAGGCAAAAGGTTTAGTAAAAATAATAACAAGAGTAATGGTTGTAGGAGTTCCTAACTGCGGTAAGTCTACATTTATAAATAAAATGGCTAAGAATAATATAGCTAAAACAGGAGATAGAGCTGGAGTTACGAAAAATAAGCAATGGATAAAAACTCCATTAGGTGTAGAAATGCTTGATACTCCAGGTGTTTTATGGCCAAAGTTTGAAGATGAAGAAACAGCATTAAATCTTGCTTTTACTGGGGCTATTAAGGATGAAGTAATGGATTCAGAAGAATTAGCTTATAAGCTTGTAGAAAGATTACAAACTTATTATCCTGAAAAATTAAAAGAAAGATATAAAATAGATGAGATTTTTGAAAATCCTTTAGATACTTTGGATGCTATAGCTAGAAAAAGAGGATGTTTAATGAAGGGCAACGAAATTGATTATATGAGAATAGCAGTTATTCTTTTAGATGAATTTAGAGGCGGAAAAATTGGAAATATAACTTTGGAACGTCCATAG
PROTEIN sequence
Length: 281
MAINWFPGHMKKTQREIKENLKLVDAVIEIRDARIPRSSANPDIDKLVGDKPRIILLNKSDLTEKSVTKQWIKHLSSENVKVLEVNCLTGSGLNAIKPAILELLKEKHDRLKAKGLVKIITRVMVVGVPNCGKSTFINKMAKNNIAKTGDRAGVTKNKQWIKTPLGVEMLDTPGVLWPKFEDEETALNLAFTGAIKDEVMDSEELAYKLVERLQTYYPEKLKERYKIDEIFENPLDTLDAIARKRGCLMKGNEIDYMRIAVILLDEFRGGKIGNITLERP*