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NECEvent2014_5_3_scaffold_7_6

Organism: NECEvent2014_5_3_Clostridium_paraputrificum_30_27

near complete RP 50 / 55 MC: 2 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: comp(3365..3862)

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MFD3_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 71.5
  • Coverage: 165.0
  • Bit_score: 252
  • Evalue 4.00e-64
rimM; 16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 71.8
  • Coverage: 163.0
  • Bit_score: 250
  • Evalue 2.50e-64
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.8
  • Coverage: 163.0
  • Bit_score: 250
  • Evalue 1.30e-63

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Taxonomy

Clostridium baratii → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 498
GTGAGTGAATATTTCAAAGTAGGTCAAATTGTTAATACTCATGGAATAAAAGGAGAAGTAAAGGTAATGGCTTTTACTGATGATGTTAACAATTTTAAAAGATATGGAAAAGTTTTAATCGATAATAAGTGGGTTGAAATCCAAGGAGTAAAGTTTCAAAAGGATAGAGTTATTCTTAAATTAGAGGGAATCGATTCTATGAATGATGCGGAAATGTATAAACAAAAGTATCTACAAGTTTTAAGGGATCAAGAGCCTGAACTTCCAGAGGATACTTATTATGTTGTAGATTTAGTGGGATGTACAGTATATGATACAAATGGAAAAGATCTAGGTAAAATATACGATGTACTACAAACTCCTAATAATGATGTTTATTGGATTGAGAAACCTAAACAATTATTAATTCCAGTTCTAAGAGATATAGTGTTAGATGTTAATATAGATGAAAAGAAAGTTCTTATAAGACCAGTAGGAGAATGGCAAGATGAGGATTAG
PROTEIN sequence
Length: 166
VSEYFKVGQIVNTHGIKGEVKVMAFTDDVNNFKRYGKVLIDNKWVEIQGVKFQKDRVILKLEGIDSMNDAEMYKQKYLQVLRDQEPELPEDTYYVVDLVGCTVYDTNGKDLGKIYDVLQTPNNDVYWIEKPKQLLIPVLRDIVLDVNIDEKKVLIRPVGEWQDED*