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NECEvent2014_5_3_scaffold_7_25

Organism: NECEvent2014_5_3_Clostridium_paraputrificum_30_27

near complete RP 50 / 55 MC: 2 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: comp(20837..21385)

Top 3 Functional Annotations

Value Algorithm Source
RsmD family RNA methyltransferase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEP6_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 82.4
  • Coverage: 182.0
  • Bit_score: 319
  • Evalue 2.30e-84
  • rbh
RsmD family RNA methyltransferase {ECO:0000313|EMBL:EEH98179.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA similarity UNIPROT
DB: UniProtKB
  • Identity: 81.9
  • Coverage: 182.0
  • Bit_score: 317
  • Evalue 9.20e-84
RNA methyltransferase, RsmD family similarity KEGG
DB: KEGG
  • Identity: 80.7
  • Coverage: 181.0
  • Bit_score: 314
  • Evalue 2.70e-83

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Taxonomy

Clostridium sp. 7_2_43FAA → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 549
GTGAGAATTATAGCAGGAAAAGCAAAAGGACGTAAGTTAATTCCTCCAGCAACCTTAGAAACAAGACCAACTTTAGATAGAGTTAAAGAGGCAATGTTTAGCATGATTCAAGGATATATTCCTAATGCTGTAGTTGTAGATGTTTTTGCAGGGACTGGTAGCTTAGGTTTAGAAGCTGCAAGCAGAGGGGCTAAGGAAGTATACCTGGTAGATAAGAGTTCCACAACTTTTCCTTTGTTAAAGGAAAATGTTAAAAATCTAAAATTTGAGGAATTTTGTAATCCTATGAATATGGATTCTTATGATGCGTTAAGATTATTAGCGAAGAAAGGTAAGAAATTTGATTTAATATTTATAGATCCTCCATATTGTAGGGAAATGATTCCAGAAGCTATCAAACTAATAGAAGAAAATGATATGTTAGTAGAGGACGGAATAATAGTTACAAAGATAGATTCTGTAGAAGAGATATATGAAGGTTATAAAGATATAAAGTTTAGTAGAAATAAGAAATATGGAAACACTACAGTATGTTTCTATAAATATTAG
PROTEIN sequence
Length: 183
VRIIAGKAKGRKLIPPATLETRPTLDRVKEAMFSMIQGYIPNAVVVDVFAGTGSLGLEAASRGAKEVYLVDKSSTTFPLLKENVKNLKFEEFCNPMNMDSYDALRLLAKKGKKFDLIFIDPPYCREMIPEAIKLIEENDMLVEDGIIVTKIDSVEEIYEGYKDIKFSRNKKYGNTTVCFYKY*