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NECEvent2014_5_3_scaffold_481_9

Organism: NECEvent2014_5_3_Pseudomonas_aeruginosa_rel_66_7

near complete RP 49 / 55 MC: 3 BSCG 43 / 51 ASCG 13 / 38 MC: 2
Location: 5346..6104

Top 3 Functional Annotations

Value Algorithm Source
Type 4 fimbrial biogenesis protein PilF n=123 Tax=Pseudomonas RepID=B7UWI6_PSEA8 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 252.0
  • Bit_score: 495
  • Evalue 3.20e-137
  • rbh
type IV pilus biogenesis/stability protein PilW similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 252.0
  • Bit_score: 495
  • Evalue 9.00e-138
Type 4 fimbrial biogenesis protein PilF {ECO:0000313|EMBL:AHW69624.1}; TaxID=1457392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="P similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 252.0
  • Bit_score: 495
  • Evalue 4.50e-137

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 759
ATGACTGTACGCGCCGCGCTGGTGTTCCTGTTGGCAGTTGGGCTGACAGGCTGCGTGACGAGCGGAGATCAGAATCCCCTGAAAACCGACAAGGGCCGTGACGAGGCGCGCGACGCCTATATCCAGCTTGGCCTCGGCTATCTCCAGCGGGGGAACACCGAGCAGGCCAAGGTGCCGCTGCGCAAGGCCCTCGAGATCGACCCTTCCAGCGCCGACGCGCACGCCGCGCTGGCGGTGGTATTCCAGACCGAGATGGAGCCCAAGCTGGCCGACGAGGAGTACCGCAAGGCGCTCGCCAGCGATAGCCGCAATGCCCGGGTACTGAACAACTACGGCGGTTTCCTCTACGAGCAGAAGCGCTACGAGGAGGCCTACCAGCGTCTCCTGGAGGCCAGCCAGGACACCCTCTATCCCGAGCGCTCGCGGGTCTTCGAGAACCTCGGCCTGGTTTCGCTGCAAATGAAGAAACCGGCCCAGGCCAAGGAGTACTTCGAGAAATCCCTGCGTCTGAACCGTAACCAGCCCAGCGTCGCGCTGGAGATGGCCGACCTGCTCTACAAGGAGCGCGAGTACGTGCCGGCTCGCCAGTACTATGATCTCTTTGCCCAGGGCGGCGGGCAGAACGCCCGCAGTCTGTTGCTGGGCATTCGTCTCGCGAAGGTCTTCGAAGACCGCGACACGGCCGCCAGCTATGGCCTGCAGTTGAAACGCCTGTACCCAGGCTCTCCCGAATATCAGGAATTCCAGGCGGAAAAATGA
PROTEIN sequence
Length: 253
MTVRAALVFLLAVGLTGCVTSGDQNPLKTDKGRDEARDAYIQLGLGYLQRGNTEQAKVPLRKALEIDPSSADAHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRNQPSVALEMADLLYKEREYVPARQYYDLFAQGGGQNARSLLLGIRLAKVFEDRDTAASYGLQLKRLYPGSPEYQEFQAEK*