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NECEvent2014_5_3_scaffold_993_2

Organism: NECEvent2014_5_3_Pseudomonas_aeruginosa_rel_66_7

near complete RP 49 / 55 MC: 3 BSCG 43 / 51 ASCG 13 / 38 MC: 2
Location: comp(586..1122)

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=2 Tax=Pseudomonas aeruginosa E2 RepID=U9DP96_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 178.0
  • Bit_score: 361
  • Evalue 5.10e-97
  • rbh
16S rRNA-processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 178.0
  • Bit_score: 364
  • Evalue 2.20e-98
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadacea similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 178.0
  • Bit_score: 364
  • Evalue 1.10e-97

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 537
ATGAGTGAAATGCCGACACCCGCCGACGACCTGGTCGTGATCGGCAAGATCGTTTCGGTGTACGGCATCCGCGGTGAGGTGAAGGTGTATTCCTTTACCGACCCGTTGGACAACCTGCTGGACTATCGCCGCTGGACGCTCCGGCGCGACGGCGAGATTCGGCAGGCCGAGCTGGTCAGGGGGCGCCTGCATGGCAAGGTCCTGGCCGCCAAGCTCAAGGGGCTCGACGATCGCGAAGAGGCCCGCACCTTCACCGGTTACGAGATCTGCATCCCGCGTAGCGAGTTGCCCTCTCTCGAGGAAGGTGAGTACTACTGGCACCAGCTGGAAGGCCTGAAGGTGATCGACCAGGGCGGGCAGTTGCTCGGCGTGATCGACCATCTGCTGGAAACCGGTGCCAACGATGTCATGGTGGTCAAGCCCTGCGCGGGCAGCCTGGACGACCGCGAGCGCCTGTTGCCCTACACCGGGCAGTGCGTGCTGTCGATCGACCTGGCCGCTGGCGAGATGCGGGTGGACTGGGACGCGGACTTCTGA
PROTEIN sequence
Length: 179
MSEMPTPADDLVVIGKIVSVYGIRGEVKVYSFTDPLDNLLDYRRWTLRRDGEIRQAELVRGRLHGKVLAAKLKGLDDREEARTFTGYEICIPRSELPSLEEGEYYWHQLEGLKVIDQGGQLLGVIDHLLETGANDVMVVKPCAGSLDDRERLLPYTGQCVLSIDLAAGEMRVDWDADF*