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NECEvent2014_8_2_scaffold_499

Alias: 178_002_scaffold_499

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_2_scaffold_499_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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30..302
DNA (273bp) protein (91aa)
Uncharacterized protein n=11 Tax=Clostridium perfringens RepID=H7CXV8_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT16245.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
NECEvent2014_8_2_scaffold_499_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(320..841)
DNA (522bp) protein (174aa)
Uncharacterized protein n=11 Tax=Clostridium perfringens RepID=H7CXV7_CLOPF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT26563.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
NECEvent2014_8_2_scaffold_499_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(842..1612)
DNA (771bp) protein (257aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CXV6_CLOPF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA16470.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_8_2_scaffold_499_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1792..3024
DNA (1233bp) protein (411aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAM
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=3 Tax=Clostridium perfringens RepID=H7CXV5_CLOPF rbh
NECEvent2014_8_2_scaffold_499_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3274..4236
DNA (963bp) protein (321aa)
Dipeptidase family protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BIT6_CLOPF rbh
Dipeptidase family protein {ECO:0000313|EMBL:EDS80449.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. J
dipeptidase family protein
NECEvent2014_8_2_scaffold_499_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4535..5281
DNA (747bp) protein (249aa)
fabG; 3-ketoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XJ34_CLOPE rbh
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:BAB81633.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perf
NECEvent2014_8_2_scaffold_499_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5602..7125)
DNA (1524bp) protein (508aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
Two-component sensor histidine kinase n=3 Tax=Clostridium perfringens RepID=Q8XJ35_CLOPE rbh
sensor histidine kinase
NECEvent2014_8_2_scaffold_499_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7125..7796)
DNA (672bp) protein (224aa)
Two-component response regulator n=11 Tax=Clostridium perfringens RepID=Q8XJ36_CLOPE rbh
DNA-binding response regulator
DNA-binding response regulator {ECO:0000313|EMBL:EDT16379.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E st
NECEvent2014_8_2_scaffold_499_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7891..9135
DNA (1245bp) protein (415aa)
Peptidase, M16 family n=3 Tax=Clostridium perfringens RepID=B1RHM2_CLOPF rbh
Peptidase, M16 family {ECO:0000313|EMBL:EDT26572.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F496
M16 family peptidase
NECEvent2014_8_2_scaffold_499_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9141..9779
DNA (639bp) protein (213aa)
Regulatory protein RecX n=3 Tax=Clostridium perfringens RepID=B1RHM3_CLOPF rbh
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="
recX; recombination regulator RecX
NECEvent2014_8_2_scaffold_499_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9785..10960
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XJ39_CLOPE rbh
transglutaminase domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81628.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_8_2_scaffold_499_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11166..11516)
DNA (351bp) protein (117aa)
TPR repeat-containing protein n=9 Tax=Clostridium perfringens RepID=H7CXU7_CLOPF
hypothetical protein
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EDT16224.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E
NECEvent2014_8_2_scaffold_499_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


12174..14816
DNA (2643bp) protein (881aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|H
valS; valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=2 Tax=Clostridium perfringens RepID=H7CXU6_CLOPF rbh
Displaying 13 items

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