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NECEvent2014_8_2_scaffold_769

Alias: 178_002_scaffold_769

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_2_scaffold_769_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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77..544
DNA (468bp) protein (156aa)
def; polypeptide deformylase (EC:3.5.1.88)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0
Peptide deformylase 2 n=5 Tax=Clostridium perfringens RepID=DEF2_CLOPE rbh
NECEvent2014_8_2_scaffold_769_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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685..1617
DNA (933bp) protein (311aa)
Ribokinase {ECO:0000313|EMBL:EDT27067.1}; EC=2.7.1.15 {ECO:0000313|EMBL:EDT27067.1};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clos
rbsK; ribokinase (EC:2.7.1.15)
Ribokinase n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RG45_CLOPF rbh
NECEvent2014_8_2_scaffold_769_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1620..2015
DNA (396bp) protein (132aa)
D-ribose pyranase {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00011477}; EC=5.4.99.62 {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00166232};; TaxID=451756 species="Bacteria; Firm
D-ribose pyranase n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RG44_CLOPF
rbsD; D-ribose pyranase
NECEvent2014_8_2_scaffold_769_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2102..3607
DNA (1506bp) protein (502aa)
Ribose import ATP-binding protein RbsA {ECO:0000256|HAMAP-Rule:MF_01716}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01716};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostri
Ribose import ATP-binding protein RbsA n=6 Tax=Clostridium perfringens RepID=RBSA_CLOP1 rbh
rbsA; ribose ABC transporter ATP-binding protein
NECEvent2014_8_2_scaffold_769_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3621..4556
DNA (936bp) protein (312aa)
Ribose ABC transporter, permease protein n=7 Tax=Clostridium perfringens RepID=H7CX09_CLOPF rbh
rbsC; ribose ABC transporter permease
Ribose ABC transporter, permease protein {ECO:0000313|EMBL:EDT24731.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfri
NECEvent2014_8_2_scaffold_769_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4578..5483
DNA (906bp) protein (302aa)
Ribose ABC transporter, ribose-binding protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RSV0_CLOPF rbh
Ribose ABC transporter, ribose-binding protein {ECO:0000313|EMBL:EDT27108.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
rbsB; ABC-type sugar transport system, periplasmic component
NECEvent2014_8_2_scaffold_769_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5622..6623
DNA (1002bp) protein (334aa)
Transcriptional regulator, LacI family n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BG61_CLOPF rbh
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EDS81180.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfring
LacI family transcription regulator
NECEvent2014_8_2_scaffold_769_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6801..10055
DNA (3255bp) protein (1085aa)
Helicase, SNF2/RAD54 family n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RSV2_CLOPF rbh
helicase, SNF2/RAD54 family
SWI/SNF family helicase {ECO:0000313|EMBL:BAB81331.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
Displaying 8 items

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