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NECEvent2014_10_1_scaffold_12

Alias: Felix_001_scaffold_12

Search features with annotation key words

Displaying items 31-60 of 154 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_10_1_scaffold_12_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31245..31706
DNA (462bp) protein (154aa)
Aspartate carbamoyltransferase regulatory chain n=1342 Tax=Enterobacteriaceae RepID=PYRI_ECO24 rbh
pyrI; aspartate carbamoyltransferase regulatorysubunit
Aspartate carbamoyltransferase regulatory chain {ECO:0000256|HAMAP-Rule:MF_00002}; TaxID=1116135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escheric
NECEvent2014_10_1_scaffold_12_31
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31779..32165
DNA (387bp) protein (129aa)
Putative endoribonuclease L-PSP (Fragment) n=1 Tax=Escherichia coli MS 110-3 RepID=E5ZR53_ECOLX
hypothetical protein
Putative endoribonuclease L-PSP {ECO:0000313|EMBL:EIH13269.1}; TaxID=869672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escher
NECEvent2014_10_1_scaffold_12_32
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32371..35067)
DNA (2697bp) protein (899aa)
Mg2+ transport ATPase, P-type 1 n=344 Tax=Enterobacteriaceae RepID=J7QJU7_ECOLX rbh
Mg(2+) transport ATPase, P-type
Magnesium-transporting ATPase, P-type 1 {ECO:0000313|EMBL:EOW30274.1}; TaxID=1182703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sourc
NECEvent2014_10_1_scaffold_12_33
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35446..36393
DNA (948bp) protein (316aa)
Repressor of treA,B,C n=629 Tax=Enterobacteriaceae RepID=J7QZ87_ECOLX rbh
treR; trehalose repressor
HTH-type transcriptional regulator treR {ECO:0000313|EMBL:EHP67275.1}; TaxID=1127356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sourc
NECEvent2014_10_1_scaffold_12_34
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36512..37933
DNA (1422bp) protein (474aa)
treB; PTS system, trehalose-specific IIB component/PTS system, trehalose-specific IIC component (EC:2.7.1.69)
PTS system, trehalose-specific IIB component / PTS system, trehalose-specific IIC component {ECO:0000313|EMBL:CDL45623.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CDL45623.1};; TaxID=1432559 species="Bacteria;
PTS system, trehalose-specific IIB component /PTS system, trehalose-specific IIC component n=36 Tax=Escherichia coli RepID=G0DDU4_ECOLX rbh
NECEvent2014_10_1_scaffold_12_35
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37983..39638
DNA (1656bp) protein (552aa)
Trehalose-6-phosphate hydrolase {ECO:0000313|EMBL:AJO86361.1}; EC=3.2.1.93 {ECO:0000313|EMBL:AJO86361.1};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enteroba
treC; trehalose-6-phosphate hydrolase (EC:3.2.1.93) rbh
Trehalose-6-phosphate hydrolase n=20 Tax=Escherichia coli RepID=G0DDU3_ECOLX rbh
NECEvent2014_10_1_scaffold_12_36
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40032..42170
DNA (2139bp) protein (713aa)
nrdD; Ribonucleotide reductase of class III (anaerobic), large subunit (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase n=141 Tax=Escherichia RepID=B1ISW7_ECOLC rbh
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:EOU96385.1}; TaxID=1169353 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.
NECEvent2014_10_1_scaffold_12_37
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42329..42793
DNA (465bp) protein (155aa)
nrdG; anaerobic ribonucleotide reductase activating protein (EC:1.97.1.-)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=1446560 species="Bacteria; Proteobacteria; Gamma
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=150 Tax=Escherichia coli RepID=A7ZVB6_ECO24 rbh
NECEvent2014_10_1_scaffold_12_38
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42838..43224)
DNA (387bp) protein (129aa)
Soluble cytochrome b562 n=305 Tax=Enterobacteriaceae RepID=C562_ECOLX
cybC; soluble cytochrome b562
Soluble cytochrome b562 {ECO:0000313|EMBL:EOW12098.1}; TaxID=1182701 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_10_1_scaffold_12_39
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43407..44759)
DNA (1353bp) protein (451aa)
Protein PmbA n=819 Tax=Enterobacteriaceae RepID=PMBA_ECO57 rbh
pmbA; peptidase PmbA
Protein pmbA {ECO:0000313|EMBL:ELE06845.1}; TaxID=1182658 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE51.;
NECEvent2014_10_1_scaffold_12_40
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44853..45404
DNA (552bp) protein (184aa)
UPF0307 protein YjgA n=1125 Tax=Enterobacteriaceae RepID=YJGA_ECO24 rbh
hypothetical protein
UPF0307 protein YjgA {ECO:0000256|HAMAP-Rule:MF_00765}; TaxID=869672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_10_1_scaffold_12_41
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45555..46928)
DNA (1374bp) protein (458aa)
mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (EC:6.3.2.-)
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase n=893 Tax=Enterobacteriaceae RepID=A1AJD8_ECOK1 rbh
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase {ECO:0000313|EMBL:EZA34429.1}; TaxID=1446704 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enter
NECEvent2014_10_1_scaffold_12_42
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47104..48102
DNA (999bp) protein (333aa)
fbp; fructose-1,6-bisphosphatase (EC:3.1.3.11)
Fructose-1,6-bisphosphatase class 1 {ECO:0000256|HAMAP-Rule:MF_01855}; Short=FBPase class 1 {ECO:0000256|HAMAP-Rule:MF_01855};; EC=3.1.3.11 {ECO:0000256|HAMAP-Rule:MF_01855};; D-fructose-1,6-bisphosph
Fructose-1,6-bisphosphatase class 1 n=3 Tax=Escherichia RepID=G7RBH8_ECOC2 rbh
NECEvent2014_10_1_scaffold_12_43
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48135..49130)
DNA (996bp) protein (332aa)
Monosaccharide-transporting ATPase n=455 Tax=Escherichia RepID=B1ISX4_ECOLC rbh
yjfF; inner membrane ABC transporter permease YjfF
Branched-chain amino acid transport system/permease component protein {ECO:0000313|EMBL:EGB70525.1}; TaxID=656449 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacte
NECEvent2014_10_1_scaffold_12_44
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49117..50139)
DNA (1023bp) protein (341aa)
Predicted sugar transporter subunit n=180 Tax=Escherichia coli RepID=C8TP50_ECO26 rbh
ytfT; putative sugar ABC transporter membrane protein
Branched-chain amino acid transport system / permease component family protein {ECO:0000313|EMBL:KEJ55962.1}; TaxID=1444223 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; E
NECEvent2014_10_1_scaffold_12_45
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50153..51655)
DNA (1503bp) protein (501aa)
Uncharacterized ABC transporter ATP-binding protein ytfR n=76 Tax=Escherichia coli RepID=E2QL20_ECOLX rbh
ytfR; putative sugar ABC transporter ATP-binding protein
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:EQY79320.1}; TaxID=1281237 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sou
NECEvent2014_10_1_scaffold_12_46
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51795..52751)
DNA (957bp) protein (319aa)
ABC transporter periplasmic-binding protein ytfQ n=662 Tax=Enterobacteriaceae RepID=E2QL19_ECOLX rbh
putative sugar transporter subunit
Putative sugar ABC transporter, periplasmic sugar-binding protein {ECO:0000313|EMBL:EDU64446.1}; TaxID=344610 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriac
NECEvent2014_10_1_scaffold_12_47
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53061..53591
DNA (531bp) protein (177aa)
Inorganic pyrophosphatase (EC:3.6.1.1)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=1444251 species="Ba
Inorganic pyrophosphatase n=526 Tax=root RepID=IPYR_ECO57 rbh
NECEvent2014_10_1_scaffold_12_48
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53671..53985)
DNA (315bp) protein (105aa)
Toxin of the ChpB-ChpS toxin-antitoxin system n=115 Tax=Escherichia RepID=E0J2I8_ECOLW
toxin ChpB
PemK-like protein 2 {ECO:0000313|EMBL:EGW98671.1}; TaxID=754086 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli S
NECEvent2014_10_1_scaffold_12_49
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54015..54266)
DNA (252bp) protein (84aa)
Antitoxin ChpS n=397 Tax=Enterobacteriaceae RepID=CHPS_ECOLI
antitoxin ChpS
Toxin-antitoxin system, antitoxin component, AbrB famil {ECO:0000313|EMBL:EGI43160.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Esche
NECEvent2014_10_1_scaffold_12_50
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54478..54819)
DNA (342bp) protein (114aa)
Gamma-glutamylcyclotransferase family protein YtfP n=1406 Tax=Enterobacteriaceae RepID=YTFP_ECO57
hypothetical protein
AIG2-like family protein {ECO:0000313|EMBL:END86959.1}; TaxID=1125642 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_10_1_scaffold_12_51
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54822..58601)
DNA (3780bp) protein (1260aa)
Uncharacterized protein n=26 Tax=Escherichia coli RepID=H5KPC5_ECOLX rbh
hypothetical protein
Translocation and assembly module TamB {ECO:0000313|EMBL:KHJ19430.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Es
NECEvent2014_10_1_scaffold_12_52
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58598..60331)
DNA (1734bp) protein (578aa)
Translocation and assembly module TamA n=614 Tax=Enterobacteriaceae RepID=TAMA_ECO57 rbh
Uncharacterized protein {ECO:0000313|EMBL:KEN62468.1}; TaxID=1444275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
OMP85 family outer membrane protein
NECEvent2014_10_1_scaffold_12_53
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60537..61175
DNA (639bp) protein (213aa)
peptide methionine sulfoxide reductase (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014
Peptide methionine sulfoxide reductase MsrA n=533 Tax=Enterobacteriaceae RepID=MSRA_ECO24 rbh
NECEvent2014_10_1_scaffold_12_54
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61498..62841
DNA (1344bp) protein (448aa)
Uncharacterized protein n=408 Tax=Enterobacteriaceae RepID=B7LCT0_ECO55 rbh
transporter
UPF0053 inner membrane protein ytfL {ECO:0000313|EMBL:EHP67299.1}; TaxID=1127356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="E
NECEvent2014_10_1_scaffold_12_55
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62903..63109)
DNA (207bp) protein (69aa)
Uncharacterized protein n=18 Tax=Enterobacteriaceae RepID=C3SFI2_ECOLX
ytfK; hypothetical protein
PF06526 family protein {ECO:0000313|EMBL:EII21434.1}; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia col
NECEvent2014_10_1_scaffold_12_56
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63434..63991
DNA (558bp) protein (186aa)
Uncharacterized protein ytfJ n=580 Tax=Enterobacteriaceae RepID=E2QL10_ECOLX rbh
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AFS76365.1}; TaxID=1133852 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_10_1_scaffold_12_57
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63981..64721)
DNA (741bp) protein (247aa)
3'(2'),5'-bisphosphate nucleotidase CysQ n=831 Tax=Enterobacteriaceae RepID=CYSQ_ECOL6 rbh
cysQ; 3'-phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase
3'(2'),5'-bisphosphate nucleotidase {ECO:0000313|EMBL:ESD40871.1}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="E
NECEvent2014_10_1_scaffold_12_58
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64911..66854
DNA (1944bp) protein (648aa)
2', 3'-cyclic nucleotide 2'-phosphodiesterase {ECO:0000313|EMBL:KHJ19437.1}; EC=3.1.3.6 {ECO:0000313|EMBL:KHJ19437.1};; EC=3.1.4.16 {ECO:0000313|EMBL:KHJ19437.1};; 2':3'-cyclic-nucleotide 2'-phosphodi
cpdB; Bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic protein (EC:3.1.4.16)
2',3'-cyclic-nucleotide 2'-phosphodiesterase n=99 Tax=Escherichia coli RepID=A7ZV92_ECO24 rbh
NECEvent2014_10_1_scaffold_12_59
Shigella dysenteriae, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(66983..67363)
DNA (381bp) protein (127aa)
Putative uncharacterized protein n=1 Tax=Escherichia coli B354 RepID=D6J5I9_ECOLX
ytfH; hypothetical protein
Redox-sensing transcriptional regulator QorR {ECO:0000313|EMBL:EFW50911.1}; TaxID=941429 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" sour
Displaying items 31-60 of 154 in total

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