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NECEvent2014_10_1_scaffold_12

Alias: Felix_001_scaffold_12

Search features with annotation key words

Displaying items 1-30 of 154 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_10_1_scaffold_12_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

347..583
DNA (237bp) protein (79aa)
Uncharacterized protein n=36 Tax=Escherichia coli RepID=G5KWH9_ECOLX
transposase IS66
Escherichia coli O25b:H4-ST131 str. EC958 chromosome, complete genome; Putative transposase {ECO:0000313|EMBL:CDN85163.1}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterob
NECEvent2014_10_1_scaffold_12_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

711..803
DNA (93bp) protein (31aa)
Uncharacterized protein n=35 Tax=Escherichia coli RepID=L3ET09_ECOLX
Putative integral membrane protein; K03475 PTS system, ascorbate-specific IIC component
Uncharacterized protein {ECO:0000313|EMBL:ELC06317.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_10_1_scaffold_12_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(783..1670)
DNA (888bp) protein (296aa)
Putative integral membrane protein rbh
Putative integral membrane protein {ECO:0000313|EMBL:CDL42871.1}; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Es
NECEvent2014_10_1_scaffold_12_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2011..2187)
DNA (177bp) protein (59aa)
Transposase ORF A IS911 n=34 Tax=Escherichia coli RepID=I4V4R4_ECOLX
transposase IS222
Transposase {ECO:0000313|EMBL:AJO86395.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
NECEvent2014_10_1_scaffold_12_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2275..3519)
DNA (1245bp) protein (415aa)
Major Facilitator Superfamily transporter n=40 Tax=Escherichia coli RepID=G5KWH6_ECOLX rbh
MFS transporter rbh
MFS transporter {ECO:0000313|EMBL:AJO86394.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
NECEvent2014_10_1_scaffold_12_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3780..4793)
DNA (1014bp) protein (338aa)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosph
4-hydroxythreonine-4-phosphate dehydrogenase n=39 Tax=Escherichia coli RepID=G0D0Q7_ECOLX rbh
4-hydroxythreonine-4-phosphate dehydrogenase rbh
NECEvent2014_10_1_scaffold_12_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4871..6388)
DNA (1518bp) protein (506aa)
D-galactarate dehydratase n=37 Tax=Escherichia coli RepID=G5KWH4_ECOLX rbh
galactarate dehydratase
Escherichia coli O25b:H4-ST131 str. EC958 chromosome, complete genome; Putative altronate hydrolase {ECO:0000313|EMBL:CDN85158.1}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria;
NECEvent2014_10_1_scaffold_12_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6405..7304)
DNA (900bp) protein (300aa)
Dihydrodipicolinate synthase n=37 Tax=Escherichia coli RepID=L3ET03_ECOLX rbh
2-keto-3-deoxy-galactonate aldolase {ECO:0000313|EMBL:AJO86391.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esche
2-keto-3-deoxy-galactonate aldolase rbh
NECEvent2014_10_1_scaffold_12_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7544..8308
DNA (765bp) protein (255aa)
Transcriptional regulator, IclR family protein n=42 Tax=Escherichia coli RepID=V0A440_ECOLX rbh
IclR family transcriptional regulator
Escherichia coli O25b:H4-ST131 str. EC958 chromosome, complete genome; Putative transcriptional regulator, IclR family {ECO:0000313|EMBL:CDN85156.1}; TaxID=1359206 species="Bacteria; Proteobacteria; G
NECEvent2014_10_1_scaffold_12_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9102..9377)
DNA (276bp) protein (92aa)
Uncharacterized protein n=37 Tax=Escherichia coli RepID=L3ET40_ECOLX
transposase
Escherichia coli O25b:H4-ST131 str. EC958 chromosome, complete genome; Uncharacterized protein {ECO:0000313|EMBL:CDN85154.1}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Ente
NECEvent2014_10_1_scaffold_12_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10545..11135)
DNA (591bp) protein (197aa)
Site-specific recombinase, phage integrase family n=42 Tax=Escherichia coli RepID=G5KWG9_ECOLX rbh
integrase
Escherichia coli O25b:H4-ST131 str. EC958 chromosome, complete genome; Prophage P4 integrase {ECO:0000313|EMBL:CDN85151.1}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Entero
NECEvent2014_10_1_scaffold_12_trna_5
unknown

Not on your lists

comp(11325..11406)
DNA (82bp)
transferRNA
NECEvent2014_10_1_scaffold_12_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11602..12621
DNA (1020bp) protein (340aa)
Alcohol dehydrogenase {ECO:0000313|EMBL:CDL42885.1}; EC=1.1.1.1 {ECO:0000313|EMBL:CDL42885.1};; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriac
Alcohol dehydrogenase n=39 Tax=Escherichia coli RepID=G0D0Q0_ECOLX rbh
alcohol dehydrogenase
NECEvent2014_10_1_scaffold_12_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12751..14253
DNA (1503bp) protein (501aa)
Uncharacterized protein n=35 Tax=Escherichia coli RepID=G5KWG6_ECOLX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDL43447.1}; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_10_1_scaffold_12_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14414..15496)
DNA (1083bp) protein (361aa)
Lipopolysaccharide ABC transporter permease n=39 Tax=Escherichia coli RepID=V8KYG2_ECOLX rbh
yjgQ; hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CDN85148.1}; YjgQ protein; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source=
NECEvent2014_10_1_scaffold_12_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15496..16596)
DNA (1101bp) protein (367aa)
Lipopolysaccharide export system permease protein LptF n=334 Tax=Enterobacteriaceae RepID=LPTF_ECO57 rbh
lipopolysaccharide ABC transporter permease LptF
Lipopolysaccharide export system permease lptF {ECO:0000313|EMBL:ELI18919.1}; TaxID=1169376 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;
NECEvent2014_10_1_scaffold_12_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16863..18374
DNA (1512bp) protein (504aa)
leucyl aminopeptidase (EC:3.4.11.1)
Cytosol aminopeptidase n=1289 Tax=Enterobacteriaceae RepID=AMPA_ECO57 rbh
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; TaxID=1268986 spec
NECEvent2014_10_1_scaffold_12_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18730..19173
DNA (444bp) protein (148aa)
holC; DNA polymerase III subunit chi (EC:2.7.7.7)
DNA polymerase III subunit chi {ECO:0000313|EMBL:EYD96605.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EYD96605.1};; TaxID=1444215 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Entero
DNA polymerase III subunit chi n=1 Tax=Escherichia coli KOEGE 71 (186a) RepID=T8IZ04_ECOLX
NECEvent2014_10_1_scaffold_12_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


19173..22028
DNA (2856bp) protein (952aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|H
Valine--tRNA ligase n=366 Tax=Enterobacteriaceae RepID=SYV_ECO57 rbh
valS; valyl-tRNA synthetase
NECEvent2014_10_1_scaffold_12_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22082..23278)
DNA (1197bp) protein (399aa)
Inner membrane protein yjgN n=36 Tax=Escherichia coli RepID=G5KWF9_ECOLX rbh
membrane protein rbh
Uncharacterised protein {ECO:0000313|EMBL:CDN85143.1}; YjgN protein; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source=
NECEvent2014_10_1_scaffold_12_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23471..23974
DNA (504bp) protein (168aa)
GCN5-related N-acetyltransferase n=257 Tax=Enterobacteriaceae RepID=B1ISV2_ECOLC rbh
yigM; Putative acetyltransferase YjgM rbh
Acetyltransferase family protein {ECO:0000313|EMBL:EMX34056.1}; TaxID=1116133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esch
NECEvent2014_10_1_scaffold_12_21
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24020..24436)
DNA (417bp) protein (139aa)
Regulator of ribonuclease activity B n=1075 Tax=Enterobacteriaceae RepID=RRAB_ECO57
rraB; hypothetical protein
Regulator of ribonuclease activity B {ECO:0000256|HAMAP-Rule:MF_01888}; TaxID=945360 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="
NECEvent2014_10_1_scaffold_12_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24598..25602
DNA (1005bp) protein (335aa)
ornithine carbamoyltransferase (EC:2.1.3.3) rbh
Ornithine carbamoyltransferase {ECO:0000313|EMBL:AJO86374.1}; EC=2.1.3.3 {ECO:0000313|EMBL:AJO86374.1};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobact
Ornithine carbamoyltransferase n=35 Tax=Escherichia coli RepID=G0DDV8_ECOLX rbh
NECEvent2014_10_1_scaffold_12_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25659..25997)
DNA (339bp) protein (113aa)
Uncharacterized protein n=17 Tax=Escherichia coli RepID=I4V3V3_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESD64876.1}; TaxID=1268997 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_10_1_scaffold_12_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25984..27255)
DNA (1272bp) protein (424aa)
Uncharacterized protein n=15 Tax=Escherichia coli RepID=L3KS25_ECOLX rbh
hypothetical protein rbh
Escherichia coli O25b:H4-ST131 str. EC958 chromosome, complete genome; Uncharacterized protein {ECO:0000313|EMBL:CDN85138.1}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Ente
NECEvent2014_10_1_scaffold_12_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27378..27830)
DNA (453bp) protein (151aa)
Toxin-antitoxin biofilm protein TabA n=45 Tax=Escherichia coli RepID=V8KXH9_ECOLX rbh
Toxin-antitoxin biofilm protein TabA
Uncharacterized protein {ECO:0000313|EMBL:CDN85137.1}; YjgK protein; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source=
NECEvent2014_10_1_scaffold_12_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27975..28568)
DNA (594bp) protein (198aa)
TetR-family transcriptional regulator n=47 Tax=Escherichia coli RepID=D3GWW4_ECO44 rbh
TetR family transcriptional regulator rbh
Putative HTH-type transcriptional regulator YjgJ,TetR family {ECO:0000313|EMBL:CDL45643.1}; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae;
NECEvent2014_10_1_scaffold_12_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28639..29352
DNA (714bp) protein (238aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=50 Tax=Escherichia coli RepID=D7YHS7_ECOLX rbh
oxidoreductase
Escherichia coli O25b:H4-ST131 str. EC958 chromosome, complete genome; Putative oxidoreductase with NAD(P)-binding Rossmann-fold domain {ECO:0000313|EMBL:CDN85135.1}; TaxID=1359206 species="Bacteria;
NECEvent2014_10_1_scaffold_12_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29483..29878
DNA (396bp) protein (132aa)
Endoribonuclease L-PSP family protein n=151 Tax=Enterobacteriaceae RepID=B1LRD4_ECOSM
putative endoribonuclease
Endoribonuclease L-PSP family protein {ECO:0000313|EMBL:KDY67281.1}; TaxID=1444184 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source=
NECEvent2014_10_1_scaffold_12_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30297..31232
DNA (936bp) protein (312aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=868192 species="Bac
Aspartate carbamoyltransferase n=1216 Tax=cellular organisms RepID=PYRB_ECO24 rbh
pyrB; aspartate carbamoyltransferase PyrB
Displaying items 1-30 of 154 in total

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