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NECEvent2014_10_1_scaffold_10_58

Organism: NECEvent2014_10_1_Escherichia_coli_52_196

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: 67887..68546

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1196033 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobac similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 219.0
  • Bit_score: 451
  • Evalue 4.90e-124
Ribosomal large subunit pseudouridine synthase A n=167 Tax=Escherichia coli RepID=RLUA_ECOL6 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 219.0
  • Bit_score: 451
  • Evalue 3.50e-124
  • rbh
yabO; 23S rRNA/tRNA pseudouridine synthase A similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 219.0
  • Bit_score: 451
  • Evalue 9.90e-125

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 660
ATGGGGATGGAAAACTACAATCCGCCGCAGGAACCCTGGCTGGTTGTCCTGTATCAGGATGACCATATTATGGTGGTCAACAAGCCGAGCGGTTTGTTGTCTGTGCCGGGTCGTCTGGAAGAGCACAAAGACAGCGTGATGACGCGCATTCAGCGTGATTATCCGCAGGCAGAATCGGTGCATCGTCTGGATATGGCTACCAGCGGCGTGATTGTAGTGGCGCTGACCAAAGCCGCGGAGCGGGAGTTAAAACGCCAGTTCCGCGAGCGCGAGCCGAAAAAACAGTATGTGGCCCGCGTCTGGGGGCATCCATCCCCTGCGGAAGGTCTGGTGGATCTGCCGCTGATTTGCGACTGGCCAAACCGCCCGAAACAGAAAGTCTGTTACGAAACAGGTAAACCTGCGCAGACGGAGTATGAAGTGGTGGAATATGCGGCGGATAACACGGCAAGAGTGGTGTTAAAACCGATTACCGGGCGTTCGCATCAGCTGCGTGTGCATATGCTGGCGCTGGGTCATCCGATTCTCGGCGATCGTTTTTATGCATCACCAGAAGCGAGAGCAATGGCACCGCGTTTGTTGCTACATGCAGAGATGCTGACGATTACCCATCCGGCGTATGGCAATAGTATGACGTTTAAAGCACCAGCGGATTTTTAA
PROTEIN sequence
Length: 220
MGMENYNPPQEPWLVVLYQDDHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDYPQAESVHRLDMATSGVIVVALTKAAERELKRQFREREPKKQYVARVWGHPSPAEGLVDLPLICDWPNRPKQKVCYETGKPAQTEYEVVEYAADNTARVVLKPITGRSHQLRVHMLALGHPILGDRFYASPEARAMAPRLLLHAEMLTITHPAYGNSMTFKAPADF*