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NECEvent2014_10_1_scaffold_22_73

Organism: NECEvent2014_10_1_Lactobacillus_crispatus_36_608

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(78032..78937)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=491076 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacil similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 301.0
  • Bit_score: 607
  • Evalue 9.60e-171
Pseudouridine synthase n=8 Tax=Lactobacillus crispatus RepID=D5H272_LACCS similarity UNIREF
DB: UNIREF100
  • Identity: 99.3
  • Coverage: 301.0
  • Bit_score: 607
  • Evalue 6.90e-171
  • rbh
rluD1; pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 99.3
  • Coverage: 301.0
  • Bit_score: 607
  • Evalue 1.90e-171

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Taxonomy

Lactobacillus crispatus → Lactobacillus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 906
ATGACTAGTTTATTTAAACTAATTGTGCAAGAAAGAGACCCCAAAAAGCTGGGTCCTTTTTTGTTAAAAAATGGTTTTTCGCATCAAGCGTTAAACAATGCTAAACACCATCATGGCATGATTTTAGTAAATCATAAAAGAAGATATACTAGCTTTAATTTGCGTGCTGGGGATGAAGTGATTTTTATCAGTGGTGAAGAAAAGAAAAATGCTTTTTTAAAGCCATCGAATAATCCAGTATCAATTGTGTTGGAGAATAAAAATTATCTTGTAGTTAACAAACCTGCAGGTGTGTTGTCAATTCCCTCACGCTATGAAGATGATGATGCGGTGGTCAATCGATTGTTGGGTTATTTTGCCCAAAAAGGACAGAAAAACTTGAAGCCGCATGTTATTACTAGATTAGATCGAGATACATCTGGTTTAGTATTGGTGGGGAAAAATGCAATTGCCCATGCTCGTTTTAGTAAAATTGGCAAGGAGAAATTTGTCAAAAAATATCATGCAATTGTACATGGCAATTTTGCTCCGAATGAGTTAACTGGTTTAATTGATCAACCGATTGGCAAAAAGGGTAGTGGAGTTAAACGTGCGGTAGTGGCAGATGGAAAGGACGCTCAAACCGCGTATCGAGTCCTAGATCAGGTTACAGGTGCTAGCTTGGTAGAGTTACGCTTGCTTACCGGTAGAACCCATCAGATCCGTGTTCACATGGCTTATCTGGGACACCCCTTATATGGTGATCCTTTATATGGAATTCAAGATGGGTTTTCACGCCAAGCCTTAAATTGCTTTTATTTAAATTTTCCGGATCCATTTAGCCAGCAAAAATGTAAAACAATTGAGTTGAATGATCCAAAAGATATGCAAGAACTGTGGCAGAAACTAATTAATAAAGAATTCTAA
PROTEIN sequence
Length: 302
MTSLFKLIVQERDPKKLGPFLLKNGFSHQALNNAKHHHGMILVNHKRRYTSFNLRAGDEVIFISGEEKKNAFLKPSNNPVSIVLENKNYLVVNKPAGVLSIPSRYEDDDAVVNRLLGYFAQKGQKNLKPHVITRLDRDTSGLVLVGKNAIAHARFSKIGKEKFVKKYHAIVHGNFAPNELTGLIDQPIGKKGSGVKRAVVADGKDAQTAYRVLDQVTGASLVELRLLTGRTHQIRVHMAYLGHPLYGDPLYGIQDGFSRQALNCFYLNFPDPFSQQKCKTIELNDPKDMQELWQKLINKEF*