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NECEvent2014_10_1_scaffold_55_27

Organism: NECEvent2014_10_1_Lactobacillus_crispatus_36_608

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(22658..24019)

Top 3 Functional Annotations

Value Algorithm Source
DEAD/DEAH box helicase n=6 Tax=Lactobacillus crispatus RepID=C2KCT1_9LACO similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 453.0
  • Bit_score: 883
  • Evalue 7.40e-254
  • rbh
Putative DEAD-box ATP-dependent RNA helicase CshB {ECO:0000313|EMBL:EEU18837.1}; TaxID=575595 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactob similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 453.0
  • Bit_score: 883
  • Evalue 1.00e-253
ATP-dependent RNA helicase similarity KEGG
DB: KEGG
  • Identity: 99.6
  • Coverage: 453.0
  • Bit_score: 882
  • Evalue 6.10e-254

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Taxonomy

Lactobacillus crispatus → Lactobacillus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1362
ATGAATAATATTTTTATAGATTCAAGAATTAAACCGGCTATTCAGGCTGGTTTAAAGAAGATCCATTTTGAAAAGCCAACTAAGGTGCAGGAGAAAGTTATTCCTGCTATGTTGTCTGACTTGAGTGTAGTAGTGCAAGCAGCAACTGGTTCAGGAAAAACGCATGCTTATTTAGTACCAATTTTTAATGAAATTGAAGAAGATAAACGCTATGTTCAAGCAATCGTTACTTTGCCTAGTCGTGAATTAGCCGATCAGCTTTATCAAGTAGCACGGCAGCTCCGTGATGCGGCAGGGATGCATTTTTCAATTGCACATCTTGCGGGCGGAACTGATCGTGAACGTCAATTAGAAAAGTATCAAAATAATACTCCACAATTGGTGATTGCAACTCCAGGACGTTTGTTAGACTTTGTTCAAAAGAAGGTTTTTGCAGTTGATCAAGTAAAAACTTTTGTTATCGACGAAGCTGACATGACCTTGGACATGGGCTTTTTGAACGACATTGATCAAGTTGCTGCTAAATTGCCGAAGGATGTCCAAATTGCTGCCTTTTCAGCAACTATTCCAGTTAAATTGTCTAACTTTTTACGCAAATATATGGCTCATCCTGATGAGATCGTTATTGATAATCCTAGTGTTATTGCGCCAACGATTAAAAACGATTTGCTTGATATTGGCTCAAAGGATCGCAAGAATGTCTTGTACAAATTGTTAACTATGGGACAACCATATTTGGCGTTGGTTTTTGCTAACACTAAGCAAAAGGTTGATGAGTTGACTAATTATTTGCAAAATCAGGGTTTGAAGGTAGCTAAAATTCACGGTGGGGTAACTGAACGTGAAAGAAAGCGTACTCTGCGTCAGGTTGAGCAAGGACAGTATCAATATGTGGTAGCTAGTGACCTAGCTGCTCGTGGCTTAGATATTGATGGTGTTAGTCTGGTTGTCAATTATGAAATACCACGTGATATTGAGTTCGTGATTCACCGGATTGGCCGGACGGGGCGTAATGGCTTATCTGGTCATGCGATAACTTTAATTCGTGAAGAAGAAATGAACCGAATTGAAGAATTGGAAAAGATGGGTGTTCATTTTGACTTCGTTGAAATTAAAAATGGTGAATTAGTGCCACGTAAACACTATCGCAGTCGTGAAAATCGTCAAAGCAAGAATCGTAAGCTTGATACCAAGCTGGTGGGTTACGTTAAAAAAGAGAAGAGAAAGCGTAAGCCAGGTTACAAGAAGAAGATTAAGCGTGCGATTCAAGAGGATAATCGTCAAAAACGTAAGTTGGAACAGCGTCATGAGGTTCGTAAGGCAAAACGTTTGAGAAAGCGCAAGCGTGAACAAGGACTTTGA
PROTEIN sequence
Length: 454
MNNIFIDSRIKPAIQAGLKKIHFEKPTKVQEKVIPAMLSDLSVVVQAATGSGKTHAYLVPIFNEIEEDKRYVQAIVTLPSRELADQLYQVARQLRDAAGMHFSIAHLAGGTDRERQLEKYQNNTPQLVIATPGRLLDFVQKKVFAVDQVKTFVIDEADMTLDMGFLNDIDQVAAKLPKDVQIAAFSATIPVKLSNFLRKYMAHPDEIVIDNPSVIAPTIKNDLLDIGSKDRKNVLYKLLTMGQPYLALVFANTKQKVDELTNYLQNQGLKVAKIHGGVTERERKRTLRQVEQGQYQYVVASDLAARGLDIDGVSLVVNYEIPRDIEFVIHRIGRTGRNGLSGHAITLIREEEMNRIEELEKMGVHFDFVEIKNGELVPRKHYRSRENRQSKNRKLDTKLVGYVKKEKRKRKPGYKKKIKRAIQEDNRQKRKLEQRHEVRKAKRLRKRKREQGL*