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NECEvent2014_1_4_scaffold_256_5

Organism: NECEvent2014_1_4_Veillonella_dispar-rel_39_6

partial RP 40 / 55 BSCG 38 / 51 ASCG 12 / 38 MC: 3
Location: comp(2497..3354)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 285.0
  • Bit_score: 555
  • Evalue 5.40e-155
DNA-directed RNA polymerase subunit beta' n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FNB9_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 285.0
  • Bit_score: 555
  • Evalue 3.80e-155
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 98.2
  • Coverage: 285.0
  • Bit_score: 547
  • Evalue 2.20e-153

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Taxonomy

Veillonella dispar → Veillonella → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 858
ATTATTGCAGCGCAATCCATCGGTGAACCTGGTACTCAGTTGACAATGCGTACATTCCATACAGGTGGTGTCGCAGGTGACGATATTACACAAGGTTTGCCTCGTGTCGAAGAATTGTTCGAAGCACGTAAACCAAAACGTAATGCTATCATCGCAGAAAACGAAGGTACAGTTCGCGTTGTACCTAACGAAGGTAAAAAAGGTACTAATACTATCTTCATTACTGGTGAAGACGGTATTGAACTCGATTACCTCATCCCTTATGGTTCCCGCATTATCGTTAAAGACGGTGATGTTGTATCCTTAGGCGCTCGTTTGACAGAAGGTTCTATCAACCCTCATGACATTATGCGCGTAATGGGTACAGAAGCAACTCAACGTTACCTCGTATACGAAGTACAAAAAGTATATAAATCTCAAGGTGTAGAAATTAACGATAAACATATCGAAGTTATCGTTCGTCAAATGCTTCATAAAGTTAAAGTTGAAACAGCTGGCGATGCAGATATGCTTCCAGGGGATATGGTCGACGTTAATACCTTTGACGAAGAAAACCGTCGTCTTACTCTTAATGGCCGTGAAAATGCTACAGGCAAACGTACATTATTGGGTATTACTAAAGCCGCTTTGGCAACGGATTCCTTCTTGTCTGCTGCGTCCTTCCAAGAAACAACACGTGTTCTTACAGATGCTGCTATCAAAGGTAAAATTGATCCATTATTGGGCTTAAAAGAAAACGTAATCATCGGTAAATTGATTCCTGCTGGTACTGGCATGAGCCGTTACCGTAAAATCGAAGTTGTGAAAAACACACCTGAAATTATCGATATTACAGAAGAATCTGCTGTAGAAGAATAA
PROTEIN sequence
Length: 286
IIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRVEELFEARKPKRNAIIAENEGTVRVVPNEGKKGTNTIFITGEDGIELDYLIPYGSRIIVKDGDVVSLGARLTEGSINPHDIMRVMGTEATQRYLVYEVQKVYKSQGVEINDKHIEVIVRQMLHKVKVETAGDADMLPGDMVDVNTFDEENRRLTLNGRENATGKRTLLGITKAALATDSFLSAASFQETTRVLTDAAIKGKIDPLLGLKENVIIGKLIPAGTGMSRYRKIEVVKNTPEIIDITEESAVEE*