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NECEvent2014_1_5_scaffold_29

Alias: 1014A0615_scaffold_29

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Displaying items 1-30 of 92 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_1_5_scaffold_29_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..2682
DNA (2682bp) protein (894aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0
Isoleucine--tRNA ligase n=7 Tax=Escherichia coli RepID=E9UA46_ECOLX rbh
ileS; isoleucyl-tRNA synthetase
NECEvent2014_1_5_scaffold_29_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2682..3176
DNA (495bp) protein (165aa)
lspA; lipoprotein signal peptidase (EC:3.4.23.36)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal pep
Lipoprotein signal peptidase n=914 Tax=Enterobacteriaceae RepID=LSPA_ECO24 rbh
NECEvent2014_1_5_scaffold_29_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3284..3733
DNA (450bp) protein (150aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales
FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase n=1341 Tax=Enterobacteriaceae RepID=FKBX_ECO57
FKBX-type 16KD peptidyl-prolyl cis-trans isomerase SlpA
NECEvent2014_1_5_scaffold_29_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3735..4685
DNA (951bp) protein (317aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxI
hydroxymethylbutenyl pyrophosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=7 Tax=Escherichia coli RepID=E9UA49_ECOLX rbh
NECEvent2014_1_5_scaffold_29_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4751..5665
DNA (915bp) protein (305aa)
Non-specific ribonucleoside hydrolase RihC {ECO:0000256|HAMAP-Rule:MF_01432}; EC=3.2.-.- {ECO:0000256|HAMAP-Rule:MF_01432};; Purine/pyrimidine ribonucleoside hydrolase {ECO:0000256|HAMAP-Rule:MF_01432
Non-specific ribonucleoside hydrolase RihC n=7 Tax=Escherichia coli RepID=E9UA50_ECOLX rbh
rihC; ribonucleoside hydrolase 3
NECEvent2014_1_5_scaffold_29_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5688..6053
DNA (366bp) protein (122aa)
Uncharacterized protein n=35 Tax=Escherichia coli RepID=E0R3I8_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EQP60448.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
hypothetical protein
NECEvent2014_1_5_scaffold_29_7
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6214..7035
DNA (822bp) protein (274aa)
dapB; dihydrodipicolinate reductase (EC:1.3.1.26)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rul
4-hydroxy-tetrahydrodipicolinate reductase n=441 Tax=Enterobacteriaceae RepID=DAPB_ECO45 rbh
NECEvent2014_1_5_scaffold_29_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7491..8639
DNA (1149bp) protein (383aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209, ECO:0000313|EMBL:CDN80401.1}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {
Carbamoyl-phosphate synthase small chain n=276 Tax=Escherichia RepID=CARA_ECOL6 rbh
carA; carbamoyl phosphate synthase small subunit
NECEvent2014_1_5_scaffold_29_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8657..11878
DNA (3222bp) protein (1074aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=868141 species="Bacteria; Proteobacteria; Gammaproteobacteria;
Carbamoyl-phosphate synthase large chain n=78 Tax=Escherichia coli RepID=B7UI78_ECO27 rbh
carB; carbamoyl phosphate synthase large subunit
NECEvent2014_1_5_scaffold_29_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12139..12534
DNA (396bp) protein (132aa)
Transcriptional activatory protein caiF n=324 Tax=Escherichia RepID=E2QEW3_ECOLX
DNA-binding transcriptional activator CaiF
DNA-binding transcriptional activator CaiF {ECO:0000313|EMBL:EMD15541.1}; TaxID=1196033 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" so
NECEvent2014_1_5_scaffold_29_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12653..13243)
DNA (591bp) protein (197aa)
caiE; carnitine operon protein CaiE (EC:4.2.1.1)
Carnitine operon protein CaiE n=267 Tax=Escherichia coli RepID=CAIE_ECO45 rbh
Carnitine operon protein CaiE {ECO:0000256|HAMAP-Rule:MF_01525}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esc
NECEvent2014_1_5_scaffold_29_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13249..14034)
DNA (786bp) protein (262aa)
Carnitinyl-CoA dehydratase {ECO:0000256|HAMAP-Rule:MF_01051}; EC=4.2.1.149 {ECO:0000256|HAMAP-Rule:MF_01051};; Crotonobetainyl-CoA hydratase {ECO:0000256|HAMAP-Rule:MF_01051}; TaxID=1268991 species="B
Carnitinyl-CoA dehydratase n=6 Tax=Escherichia coli RepID=E9UA60_ECOLX rbh
caiD; carnitinyl-CoA dehydratase
NECEvent2014_1_5_scaffold_29_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14143..15696)
DNA (1554bp) protein (518aa)
Probable crotonobetaine/carnitine-CoA ligase {ECO:0000256|HAMAP-Rule:MF_01524}; EC=6.2.1.- {ECO:0000256|HAMAP-Rule:MF_01524};; TaxID=1182682 species="Bacteria; Proteobacteria; Gammaproteobacteria; Ent
caiC; crotonobetaine/carnitine-CoA ligase (EC:6.3.2.-)
AMP-binding enzyme n=13 Tax=Escherichia coli RepID=E9UA61_ECOLX rbh
NECEvent2014_1_5_scaffold_29_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15769..16986)
DNA (1218bp) protein (406aa)
L-carnitine CoA-transferase {ECO:0000255|HAMAP-Rule:MF_01050}; EC=2.8.3.21 {ECO:0000255|HAMAP-Rule:MF_01050};; Crotonobetainyl-CoA:carnitine CoA-transferase {ECO:0000255|HAMAP-Rule:MF_01050}; TaxID=43
Crotonobetainyl-CoA:carnitine CoA-transferase n=304 Tax=Escherichia RepID=CAIB_ECO45 rbh
caiB; crotonobetainyl-CoA:carnitine CoA-transferase
NECEvent2014_1_5_scaffold_29_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17114..18256)
DNA (1143bp) protein (381aa)
Crotonobetainyl-CoA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01052}; EC=1.3.99.- {ECO:0000256|HAMAP-Rule:MF_01052};; Crotonobetainyl-CoA reductase {ECO:0000256|HAMAP-Rule:MF_01052}; TaxID=1182699 spec
Crotonobetainyl-CoA dehydrogenase n=1275 Tax=Bacteria RepID=CAIA_ECO24 rbh
caiA; Crotonobetainyl-CoA dehydrogenase
NECEvent2014_1_5_scaffold_29_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18287..19801)
DNA (1515bp) protein (505aa)
L-carnitine/gamma-butyrobetaine antiporter n=235 Tax=Escherichia coli RepID=CAIT_ECO27 rbh
caiT; L-carnitine/gamma-butyrobetaine antiporter
L-carnitine/gamma-butyrobetaine antiporter {ECO:0000256|HAMAP-Rule:MF_01049}; TaxID=868133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;"
NECEvent2014_1_5_scaffold_29_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20274..21044
DNA (771bp) protein (257aa)
Protein FixA n=322 Tax=Escherichia RepID=FIXA_ECO27 rbh
fixA; electron transfer flavoprotein FixA
Protein FixA {ECO:0000256|HAMAP-Rule:MF_01055}; TaxID=1182683 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE
NECEvent2014_1_5_scaffold_29_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21059..22000
DNA (942bp) protein (314aa)
Protein FixB n=29 Tax=Escherichia coli RepID=E9UA67_ECOLX rbh
Protein FixB {ECO:0000256|HAMAP-Rule:MF_01056}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908
fixB; putative electron transfer flavoprotein FixB
NECEvent2014_1_5_scaffold_29_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22051..23337
DNA (1287bp) protein (429aa)
Protein FixC n=670 Tax=Enterobacteriaceae RepID=FIXC_ECOL6 rbh
fixC; putative oxidoreductase with FAD/NAD(P)-binding domain
FAD binding domain protein {ECO:0000313|EMBL:EHU33914.1}; TaxID=868138 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_1_5_scaffold_29_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23334..23621
DNA (288bp) protein (96aa)
Ferredoxin-like protein FixX n=1153 Tax=Enterobacteriaceae RepID=FIXX_ECO57
fixX; ferredoxin-like protein FixX
Ferredoxin-like protein fixX {ECO:0000313|EMBL:EHP65186.1}; TaxID=1127356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheric
NECEvent2014_1_5_scaffold_29_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23680..25011
DNA (1332bp) protein (444aa)
Metabolite transport protein yaaU n=311 Tax=Escherichia RepID=E2QEX4_ECOLX rbh
yaaU; metabolite transporter
Sugar (And other) transporter family protein {ECO:0000313|EMBL:EHU63647.1}; TaxID=868142 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" s
NECEvent2014_1_5_scaffold_29_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25119..25649
DNA (531bp) protein (177aa)
Glutathione-regulated potassium-efflux system ancillary protein KefF n=848 Tax=Enterobacteriaceae RepID=KEFF_ECO24 rbh
NAD(P)H dehydrogenase (quinone)
Glutathione-regulated potassium-efflux system ancillary protein KefF {ECO:0000256|HAMAP-Rule:MF_01414}; Quinone oxidoreductase KefF {ECO:0000256|HAMAP-Rule:MF_01414}; TaxID=1281213 species="Bacteria;
NECEvent2014_1_5_scaffold_29_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25642..27504
DNA (1863bp) protein (621aa)
Glutathione-regulated potassium-efflux system protein KefC n=102 Tax=Escherichia RepID=KEFC_ECO27 rbh
kefC; glutathione-regulated potassium-efflux system protein KefC
Glutathione-regulated potassium-efflux system protein KefC {ECO:0000256|HAMAP-Rule:MF_01413}; K(+)/H(+) antiporter {ECO:0000256|HAMAP-Rule:MF_01413}; TaxID=656417 species="Bacteria; Proteobacteria; Ga
NECEvent2014_1_5_scaffold_29_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27585..28175
DNA (591bp) protein (197aa)
dihydrofolate reductase n=1 Tax=Escherichia coli RepID=UPI000366A1F6 rbh
folA; dihydrofolate reductase
Dihydrofolate reductase {ECO:0000313|EMBL:ELE59156.1}; TaxID=1182682 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_1_5_scaffold_29_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28261..28494
DNA (234bp) protein (78aa)
Antitoxin of gyrase inhibiting toxin-antitoxin system (CcdA-like protein) n=625 Tax=Escherichia RepID=E2QEX8_ECOLX
ccdA; post-segregation antitoxin CcdA
Post-segregation antitoxin CcdA family protein {ECO:0000313|EMBL:KEO39649.1}; TaxID=1444163 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;
NECEvent2014_1_5_scaffold_29_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28497..28811
DNA (315bp) protein (105aa)
Toxin of gyrase inhibiting toxin-antitoxin system n=293 Tax=Escherichia RepID=E2QEX9_ECOLX
CcdB-like protein
CcdB family protein {ECO:0000313|EMBL:EHU49386.1}; TaxID=868141 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli D
NECEvent2014_1_5_scaffold_29_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28808..29656)
DNA (849bp) protein (283aa)
Bis(5'-nucleosyl)-tetraphosphatase, symmetrical {ECO:0000255|HAMAP-Rule:MF_00199}; EC=3.6.1.41 {ECO:0000255|HAMAP-Rule:MF_00199};; Ap4A hydrolase {ECO:0000255|HAMAP-Rule:MF_00199}; Diadenosine 5',5'''
Bis(5'-nucleosyl)-tetraphosphatase, symmetrical n=180 Tax=Escherichia coli RepID=APAH_ECO27 rbh
apaH; bis(5'-nucleosyl)-tetraphosphatase, symmetrical
NECEvent2014_1_5_scaffold_29_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29663..30040)
DNA (378bp) protein (126aa)
Protein ApaG n=1175 Tax=Enterobacteriaceae RepID=APAG_ECO24
Co2+ and Mg2+ efflux associated protein ApaG
Protein ApaG {ECO:0000256|HAMAP-Rule:MF_00791, ECO:0000256|SAAS:SAAS00014786}; TaxID=1446580 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.
NECEvent2014_1_5_scaffold_29_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(30043..30864)
DNA (822bp) protein (274aa)
ksgA; dimethyladenosine transferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rR
Ribosomal RNA small subunit methyltransferase A n=337 Tax=Escherichia RepID=RSMA_ECO27 rbh
NECEvent2014_1_5_scaffold_29_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30861..31850)
DNA (990bp) protein (330aa)
pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosph
4-hydroxythreonine-4-phosphate dehydrogenase n=253 Tax=Escherichia RepID=PDXA_ECOL6 rbh
Displaying items 1-30 of 92 in total

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