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NECEvent2014_1_5_scaffold_225_13

Organism: NECEvent2014_1_5_Clostridium_butyricum_28_11

near complete RP 52 / 55 MC: 4 BSCG 50 / 51 MC: 4 ASCG 14 / 38 MC: 2
Location: 12317..13222

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 301.0
  • Bit_score: 591
  • Evalue 7.10e-166
yjbO; RNA pseudouridine synthase YjbO (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 83.6
  • Coverage: 299.0
  • Bit_score: 505
  • Evalue 1.00e-140
Ribosomal large subunit pseudouridine synthase, RluA family n=3 Tax=Clostridium butyricum RepID=B1R1B5_CLOBU similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 301.0
  • Bit_score: 591
  • Evalue 5.10e-166
  • rbh

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Taxonomy

Clostridium butyricum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 906
ATGAGTATCTTAGAAAAAAAGGTGACTGGAATAGAAGAGGGAACTAAAATAAGAGAATATTTAAAGATGGAAATGGGATTATCTACAAGATTAATCAGAAGTGCATCCATTGATAAAAGAATATTTGTAAATGACATTCCAGTAAAAATGAATCGTGTTATCAATGAAGGTGAAGTAATAAAAATAGATTTAGCAAAAGATGAAAGTCAAGATATTGCACCAGAAAAGATGGATATTGAAATAATATATGAAGATGAAGATATATTAGTAGTGAATAAGAAACCATTTATGGTAGTTCATCCTACAAAGAGTTATCAAAGTGGAACACTTGCAAATGGTGTAATAAATTATTTTATGGAAAGTGGTCAAAACTGTATTGTAAGACTTGTCTCAAGATTGGATATGAATACATCTGGACTTATAATAATTGCTAAAAATCAATTTTCTCATGGAATGCTTTCGAAGGAAATGACTGAAAATAAAGTTACTAAGAGATATCTTGCAGTTGTTCATGGGATATTAGAAAATGAAGAAGGAACTATTGATCGTCCAATATATAGACCAGAAGGAATTGATTTTGGAATAATGAGAATAGTTGATGAAAGAGGCCAAAGAAGTATAACTCATTATAAAGTAATAGAAAAGTATGAAAATGCAAGTCTTGTTGAATGTACACTTGAAACAGGAAGAACCCATCAGATAAGAGTACATTTAAGCAGTATAGGACACCCTATATACGGTGATTCTCTATATGGTAGTGGAGATGAAGAGCAGGATTTAATAAGCAGACAGGCGCTTCATGCATATTCATTAGATTTTAGATCACCAAGAACTGGTGAAATCCTTTCTTTAAAATCTAATCTTCCAGAAGACATTAAAACTTTAATAGAGAAAATTAAAAAGTAG
PROTEIN sequence
Length: 302
MSILEKKVTGIEEGTKIREYLKMEMGLSTRLIRSASIDKRIFVNDIPVKMNRVINEGEVIKIDLAKDESQDIAPEKMDIEIIYEDEDILVVNKKPFMVVHPTKSYQSGTLANGVINYFMESGQNCIVRLVSRLDMNTSGLIIIAKNQFSHGMLSKEMTENKVTKRYLAVVHGILENEEGTIDRPIYRPEGIDFGIMRIVDERGQRSITHYKVIEKYENASLVECTLETGRTHQIRVHLSSIGHPIYGDSLYGSGDEEQDLISRQALHAYSLDFRSPRTGEILSLKSNLPEDIKTLIEKIKK*