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NECEvent2014_5_7_scaffold_324

Alias: 175_006_scaffold_324

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_7_scaffold_324_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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721..1944
DNA (1224bp) protein (408aa)
Uncharacterized protein n=73 Tax=Escherichia coli RepID=B7NEE0_ECOLU rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ESA95940.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_5_7_scaffold_324_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2189..2755
DNA (567bp) protein (189aa)
Outer membrane protein slp n=1 Tax=Escherichia coli UMEA 3052-1 RepID=T8M3Y3_ECOLX rbh
slp; outer membrane lipoprotein
Outer membrane protein slp {ECO:0000313|EMBL:EMX82470.1}; TaxID=1116119 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichi
NECEvent2014_5_7_scaffold_324_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2908..3438
DNA (531bp) protein (177aa)
Transcriptional regulator n=146 Tax=Escherichia coli RepID=D3H0U7_ECO44 rbh
yhiF; putative DNA-binding transcriptional regulator rbh
HTH-type transcriptional regulator dctR {ECO:0000313|EMBL:EOU87495.1}; TaxID=1169353 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sourc
NECEvent2014_5_7_scaffold_324_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3499..4527)
DNA (1029bp) protein (343aa)
Heme oxygenase n=76 Tax=Escherichia coli RepID=B7NEE3_ECOLU rbh
chuS; Heme oxygenase rbh
Hemin transport protein HmuS {ECO:0000313|EMBL:ESA95944.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheric
NECEvent2014_5_7_scaffold_324_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4576..6558)
DNA (1983bp) protein (661aa)
Outer membrane hemin receptor n=86 Tax=Escherichia coli RepID=B7NEE4_ECOLU rbh
chuA; outer membrane hemin receptor rbh
Outer membrane hemin receptor ChuA {ECO:0000313|EMBL:EQX84895.1}; TaxID=1281213 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Es
NECEvent2014_5_7_scaffold_324_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7242..8156
DNA (915bp) protein (305aa)
Periplasmic binding protein n=81 Tax=Escherichia coli RepID=D7X6X2_ECOLX rbh
chuT; putative periplasmic binding protein
Periplasmic binding protein {ECO:0000313|EMBL:EQX84896.1}; TaxID=1281213 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherich
NECEvent2014_5_7_scaffold_324_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8254..9513
DNA (1260bp) protein (420aa)
coproporphyrinogen III oxidase (EC:1.3.99.22)
Coproporphyrinogen III oxidase n=86 Tax=Escherichia coli RepID=D6IVT3_ECOLX rbh
Radical SAM domain protein {ECO:0000313|EMBL:ESA95950.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichi
NECEvent2014_5_7_scaffold_324_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9526..10020
DNA (495bp) protein (165aa)
Uncharacterized protein n=86 Tax=Escherichia coli RepID=B7NEE7_ECOLU rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:EQX84898.1}; TaxID=1281213 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_5_7_scaffold_324_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10020..10643
DNA (624bp) protein (208aa)
Uncharacterized protein n=82 Tax=Escherichia coli RepID=B7NEE8_ECOLU rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:EFJ73981.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_5_7_scaffold_324_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10728..11684
DNA (957bp) protein (319aa)
Hemin transport system permease hmuU n=83 Tax=Escherichia coli RepID=D6IVT6_ECOLX rbh
chuU; putative hemin transport system permease rbh
Uncharacterized protein {ECO:0000313|EMBL:EQX84900.1}; TaxID=1281213 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_5_7_scaffold_324_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11681..12451
DNA (771bp) protein (257aa)
Hemin import ATP-binding protein HmuV {ECO:0000256|HAMAP-Rule:MF_01718, ECO:0000256|SAAS:SAAS00041307}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01718, ECO:0000256|SAAS:SAAS00041330};; TaxID=1268986 spec
HmuV n=5 Tax=Escherichia coli RepID=D6IVT7_ECOLX rbh
hmuV; hemin importer ATP-binding subunit
NECEvent2014_5_7_scaffold_324_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12503..13078)
DNA (576bp) protein (192aa)
Mg(2+) transport ATPase inner membrane protein n=3 Tax=Escherichia coli RepID=L2XYC3_ECOLX rbh
yhiD; putative Mg(2+) transport ATPase
Mg(2+) transport ATPase inner membrane protein {ECO:0000313|EMBL:EQX84902.1}; TaxID=1281213 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;
NECEvent2014_5_7_scaffold_324_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13214..13552)
DNA (339bp) protein (113aa)
Acid stress chaperone HdeB n=21 Tax=Escherichia coli RepID=B1LJ51_ECOSM
acid-resistance protein
Acid stress chaperone HdeB {ECO:0000256|HAMAP-Rule:MF_00947}; Flags: Precursor;; TaxID=1444081 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichi
NECEvent2014_5_7_scaffold_324_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13656..13988)
DNA (333bp) protein (111aa)
Acid stress chaperone HdeA n=981 Tax=Enterobacteriaceae RepID=HDEA_ECO57
hypothetical protein
Acid stress chaperone HdeA {ECO:0000256|HAMAP-Rule:MF_00946}; Flags: Precursor;; TaxID=1330457 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichi
NECEvent2014_5_7_scaffold_324_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14243..14815
DNA (573bp) protein (191aa)
Acid-resistance membrane protein n=112 Tax=Escherichia coli RepID=B7NEF4_ECOLU rbh
hdeD; putative acid resistance protein rbh
Protein hdeD {ECO:0000313|EMBL:ELG85646.1}; TaxID=1182725 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE146.
NECEvent2014_5_7_scaffold_324_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15612..16139
DNA (528bp) protein (176aa)
Transcriptional regulator GadE n=1330 Tax=Enterobacteriaceae RepID=GADE_ECO57 rbh
putative DNA-binding transcriptional activator
Transcriptional regulator GadE {ECO:0000313|EMBL:EGI08738.1}; TaxID=656414 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheri
NECEvent2014_5_7_scaffold_324_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16140..16418)
DNA (279bp) protein (93aa)
Uncharacterized protein n=70 Tax=Escherichia coli RepID=H1C0F4_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EHP64801.1}; TaxID=1127356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
hypothetical protein
NECEvent2014_5_7_scaffold_324_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16478..17635
DNA (1158bp) protein (386aa)
Multidrug resistance efflux transporter n=105 Tax=Escherichia coli RepID=B7NEF6_ECOLU rbh
mdtE; multidrug efflux system protein MdtE
Acriflavine resistance protein A {ECO:0000313|EMBL:ESA93010.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esch
NECEvent2014_5_7_scaffold_324_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17660..20773
DNA (3114bp) protein (1038aa)
Multidrug transporter, RpoS-dependent n=80 Tax=Escherichia coli RepID=B7NEF7_ECOLU rbh
mdtF; multidrug transporter, RpoS-dependent rbh
Multidrug resistance protein MdtF {ECO:0000313|EMBL:EFJ73971.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esch
NECEvent2014_5_7_scaffold_324_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20710..20991)
DNA (282bp) protein (94aa)
Uncharacterized protein n=73 Tax=Escherichia coli RepID=H1C0F7_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ESA93008.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
hypothetical protein
NECEvent2014_5_7_scaffold_324_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21136..21864)
DNA (729bp) protein (243aa)
DNA-binding transcriptional activator n=105 Tax=Escherichia coli RepID=B7NEF8_ECOLU rbh
gadW; DNA-binding transcriptional activator
HTH-type transcriptional regulator gadW {ECO:0000313|EMBL:CDK48013.1}; TaxID=1433131 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sourc
NECEvent2014_5_7_scaffold_324_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22233..23057)
DNA (825bp) protein (275aa)
DNA-binding transcriptional dual regulator n=81 Tax=Escherichia coli RepID=B7NEF9_ECOLU rbh
gadX; DNA-binding transcriptional regulator GadX rbh
AraC-family transcriptional regulator {ECO:0000313|EMBL:CBG36636.1}; TaxID=216592 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="
NECEvent2014_5_7_scaffold_324_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23417..23521)
DNA (105bp) protein (35aa)
Glutamate decarboxylase {ECO:0000256|RuleBase:RU361171}; EC=4.1.1.15 {ECO:0000256|RuleBase:RU361171, ECO:0000313|EMBL:CKG97418.1};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; En
Glutamate decarboxylase alpha domain protein (Fragment) n=1 Tax=Escherichia coli P0304816.4 RepID=N4RF35_ECOLX
gadA; glutamate decarboxylase
Displaying 23 items

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