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NECEvent2014_5_7_scaffold_402_16

Organism: NECEvent2014_5_7_Escherichia_coli_50_56_partial

partial RP 29 / 55 MC: 4 BSCG 28 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: comp(17842..18240)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S2 n=1 Tax=Escherichia coli P0305260.2 RepID=N3QJU0_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 132.0
  • Bit_score: 258
  • Evalue 3.40e-66
rpsB; 30S ribosomal protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 132.0
  • Bit_score: 258
  • Evalue 9.70e-67
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheric similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 132.0
  • Bit_score: 258
  • Evalue 4.80e-66

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 399
TCCATCAAACGTCTGAAAGACCTGGAAACTCAGTCTCAGGACGGTACTTTCGACAAGCTGACCAAGAAAGAAGCGCTGATGCGCACTCGTGAGCTGGAGAAACTGGAAAACAGCCTGGGCGGTATCAAAGACATGGGCGGTCTGCCGGACGCTCTGTTTGTAATCGATGCTGACCACGAACACATTGCTATCAAAGAAGCAAACAACCTGGGTATTCCGGTATTTGCTATCGTTGATACCAACTCTGATCCGGACGGTGTTGACTTCGTTATCCCGGGTAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCAGGATCTGGCTTCCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAA
PROTEIN sequence
Length: 133
SIKRLKDLETQSQDGTFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREGRSQDLASQAEESFVEAE*