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NECEvent2014_5_1_scaffold_229_6

Organism: NECEvent2014_5_1_Clostridium_paraputrificum_30_65

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 15 / 38 MC: 2
Location: 4015..4854

Top 3 Functional Annotations

Value Algorithm Source
Transcription antiterminator LicT n=6 Tax=Clostridium difficile RepID=D5Q863_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 57.2
  • Coverage: 278.0
  • Bit_score: 352
  • Evalue 3.70e-94
  • rbh
Transcription antiterminator, PTS operon regulator {ECO:0000313|EMBL:CCK88443.1}; TaxID=1215059 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 57.2
  • Coverage: 278.0
  • Bit_score: 352
  • Evalue 5.20e-94
bglG1; transcription antiterminator similarity KEGG
DB: KEGG
  • Identity: 57.6
  • Coverage: 278.0
  • Bit_score: 351
  • Evalue 2.30e-94

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 840
ATGGTTATTTCAAAGATACTAAATAATAATGTTATTGTTAGTTGCGACTCAAATGGTAATGAAATTATTGCTATGGGGAAGGGAATCGCTTATAAGAAAAAATGTGGAGAAGTTATTGAAGATGGACTTATAGATAAAGTTTATACTTTATCTAATAAAGATATTTCAAATAAGTTCCAAGAGTTGTTATCAAATATTCCAATAGAGTATTTGAATATTTCAAATGAAATAATTGAATATGCCAAAGTAACCCTAGGAAAGAACTTAAATGATAGTATTTATATTTCATTGACTGACCACTTAGGAACTTCTATAGAAAGAGCTAAAAATAAAATTTTTGTTAGAAATGCAATGCTTTGGGAAATAAAAAGGTTTTATAAGGAAGAATATAAAATTGGTTTAAAAGTATTGGACAAGATTAAAGAGAAGTTTGATATAGAGCTTCCAGAAGATGAAGCAGGTTTTATTGCACTACATATAGTAAATGCTCAATTAGATGAAACTATATCAGTGGTATATGATATTACTAAGGTTATGCAAGAAGTAGCTAATATAGTTAAGTACCATTTTGGAATAACATTTGATGAGAACTCAGTTTATTATTATCGTTTTATAACTCATTTAAAATTCTTTGCTCAAAGACTGTTTAACAAAAATGAATATAAGGGACAAGATAATGATAGTTTAATGGAGCTAATAAAGAGTAAGTATGAAGATGCATATGCTTGTGTTCAAAAGGTAACAGATTTTATTAAGAATAAGTATTCATATGACTTATCAGAGGATGAGCAATTATATCTTACAATTCACATTGCAAGAATTGTAGAAGAAACAAAATAG
PROTEIN sequence
Length: 280
MVISKILNNNVIVSCDSNGNEIIAMGKGIAYKKKCGEVIEDGLIDKVYTLSNKDISNKFQELLSNIPIEYLNISNEIIEYAKVTLGKNLNDSIYISLTDHLGTSIERAKNKIFVRNAMLWEIKRFYKEEYKIGLKVLDKIKEKFDIELPEDEAGFIALHIVNAQLDETISVVYDITKVMQEVANIVKYHFGITFDENSVYYYRFITHLKFFAQRLFNKNEYKGQDNDSLMELIKSKYEDAYACVQKVTDFIKNKYSYDLSEDEQLYLTIHIARIVEETK*