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NECEvent2014_5_8_scaffold_784_12

Organism: NECEvent2014_5_8_Escherichia_coli_51_170_partial

partial RP 24 / 55 MC: 4 BSCG 23 / 51 MC: 2 ASCG 10 / 38 MC: 3
Location: comp(12021..12524)

Top 3 Functional Annotations

Value Algorithm Source
TRAP transporter, DctQ-like membrane protein n=61 Tax=Escherichia coli RepID=D7XC77_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 167.0
  • Bit_score: 318
  • Evalue 4.60e-84
  • rbh
putative TRAP-type C4-dicarboxylate transport system, small permease similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 167.0
  • Bit_score: 318
  • Evalue 1.30e-84
  • rbh
TRAP transporter, DctQ-like membrane protein {ECO:0000313|EMBL:ESA84956.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 167.0
  • Bit_score: 318
  • Evalue 6.50e-84

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 504
ATGATATTTAACCGCCTGAAACTTGCGGTAGACCGCGTCATTGCCGCGTTTTCTGTCGCCGTAATGCTTGCTCTGGTTGTATGCGTAGTCTGGCAAGTATTTAGCCGCTACGTACTTAACCAGCCAAGTACATTAACCGATGAGCTGGCACGCTTTTTGATGATCTGGGTAGGATTATTAGGTGCTGCATATACCGTCGGCGCGCAGCGACATCTCTCTATCGATTTATTTGCTCTCGCCCTGAATAAGCGCAAGAAATTACTTCTTAGTATAGTCATTAACGTTCTTATTTTAGGTTTTGCCGGTTCGGTCATTGTGACTGGTGGCCTGAAATTAATTGATAAAACGCTGGCAACATCACAAGTATCTGCCGCTATGCAAATACCGATGGGATACGTATATATCATTCTGCCATTAAGTGGAGTGGTGATGATGTTTTATGCCTTGTGTTTTATTAATCAAAGCATTCAACAACTGAAACAACCTGCGCAGGAGGCCAGTTAA
PROTEIN sequence
Length: 168
MIFNRLKLAVDRVIAAFSVAVMLALVVCVVWQVFSRYVLNQPSTLTDELARFLMIWVGLLGAAYTVGAQRHLSIDLFALALNKRKKLLLSIVINVLILGFAGSVIVTGGLKLIDKTLATSQVSAAMQIPMGYVYIILPLSGVVMMFYALCFINQSIQQLKQPAQEAS*