ggKbase home page

NECEvent2014_5_8_scaffold_39_24

Organism: NECEvent2014_5_8_Veillonella_oral_taxon_158-rel_39_297

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 31200..32123

Top 3 Functional Annotations

Value Algorithm Source
LysR substrate binding domain protein n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LBB9_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 307.0
  • Bit_score: 611
  • Evalue 6.30e-172
  • rbh
LysR substrate binding domain protein {ECO:0000313|EMBL:EFR60668.1}; TaxID=879309 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 307.0
  • Bit_score: 611
  • Evalue 8.90e-172
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 99.7
  • Coverage: 307.0
  • Bit_score: 609
  • Evalue 6.80e-172

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Veillonella sp. oral taxon 158 → Veillonella → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 924
ATGGATTTTCATCATTTGAAATACTTCGTTGAAGTAGCTGATCAAAAAAGCTTCAGTAAGGCTGCGAGGAATTTACACATCTCCCAATCTGCTATCAGCCGTACTATCAAAGCTTTAGAAGACGAACTTGGTGTTGTTCTCTTCATGCGTAATGCTAAATCTGTAGAACTTACTGATGGGGGTACCATCTTCTTAACCCACGCTAAACGCGTTGTGTTTATGTTTGAACATCTAAAAACTGATTTTGAAAATGAATTTCGTTTGGAGCAAGGTTCCATCCGAATTGGTATTCCACCAATTACAGATGCACCAATCTTTGCCCAATTATTAGGGGAGTTCAAAAAAGTATATCCGCAAATTGAATTAGAGCTATATGAACAAGGTTCTAAAAAGGTTGAAATCAGCGTTCAAGAAGGTTTAATTGATATTGGTATCATCTGTACTAAACCAAACCCTAAAGAATTTGAGTCCTTCTACCTTACTAGTGACCCACTTTCCGTTATCATTCCAAAATCTAGCCCTCTAGCGAAGGAAAAAGAAATTCGTTTAGAAATGTTAGCTGATGAATCCTTTGTATTGCACAAAGACGACTTCAACTTACATGACGAAATCATCAAAGCTTGTAAGCACACCGGTTTCCAACCGCATATCGTGTTTGAAACAAGTCAACGTGATCTTATGTTACAAACGGTTAGTGCAGACCTTGCCATCGCATTGTTACCATCTCGCCTCTGCCCTGAGGTAGGTGAAAACACTGAGGTTGGTTCCAAGGTTGTCGTAAGACCACTAGTGCCTGAAATCATTCATACCCTCTATGTTATTTGGAAAAAAGGTCATTACCTCTCCCACGCTTCTCGCTTGTGGTTAGACTTTGTAAATTCCAAATTACCATTACCTGGATTACAACTCGAGGATCGTCAATAA
PROTEIN sequence
Length: 308
MDFHHLKYFVEVADQKSFSKAARNLHISQSAISRTIKALEDELGVVLFMRNAKSVELTDGGTIFLTHAKRVVFMFEHLKTDFENEFRLEQGSIRIGIPPITDAPIFAQLLGEFKKVYPQIELELYEQGSKKVEISVQEGLIDIGIICTKPNPKEFESFYLTSDPLSVIIPKSSPLAKEKEIRLEMLADESFVLHKDDFNLHDEIIKACKHTGFQPHIVFETSQRDLMLQTVSADLAIALLPSRLCPEVGENTEVGSKVVVRPLVPEIIHTLYVIWKKGHYLSHASRLWLDFVNSKLPLPGLQLEDRQ*