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NECEvent2014_6_3_scaffold_29

Alias: 176_003_scaffold_29

Search features with annotation key words

Displaying items 1-30 of 93 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_3_scaffold_29_1
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(163..771)
-----------------
DNA (609bp)
protein (203aa)
Uncharacterized protein {ECO:0000313|EMBL:KJU70732.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
putative membrane protein
NECEvent2014_6_3_scaffold_29_2
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(824..1807)
-----------------
DNA (984bp)
protein (328aa)
gluP2; rhomboid protease GluP (EC:3.4.21.105)
Rhomboid protease GluP {ECO:0000313|EMBL:AGF58360.1}; EC=3.4.21.105 {ECO:0000313|EMBL:AGF58360.1};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;
NECEvent2014_6_3_scaffold_29_3
unknown

Not on your lists

1886..3421
-----------------
DNA (1536bp)
protein (512aa)

This feature has no annotations

NECEvent2014_6_3_scaffold_29_4
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3533..4882
-----------------
DNA (1350bp)
protein (450aa)
Putative DNA modification/repair radical SAM protein {ECO:0000313|EMBL:EKQ51022.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clost
radical SAM domain-containing protein
NECEvent2014_6_3_scaffold_29_5
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4886..5620
-----------------
DNA (735bp)
protein (245aa)
Putative DNA metabolism protein {ECO:0000313|EMBL:EKQ51023.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley
hypothetical protein
NECEvent2014_6_3_scaffold_29_6
[Clostridium] cellulolyticum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5683..6132
-----------------
DNA (450bp)
protein (150aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL74896.1}; Flags: Precursor;; TaxID=394503 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridi
NECEvent2014_6_3_scaffold_29_7
Clostridium autoethanogenum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6147..6368
-----------------
DNA (222bp)
protein (74aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGY78254.1}; TaxID=1341692 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium autoethanogenum DSM 10
NECEvent2014_6_3_scaffold_29_8
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6380..6523
-----------------
DNA (144bp)
protein (48aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX44108.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM
NECEvent2014_6_3_scaffold_29_9
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6558..6992)
-----------------
DNA (435bp)
protein (145aa)
heat shock protein Hsp20
Heat shock protein Hsp20 {ECO:0000313|EMBL:CDM69831.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
NECEvent2014_6_3_scaffold_29_10
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7009..7440)
-----------------
DNA (432bp)
protein (144aa)
hsp; 18 kDa heat shock protein Hsp
18 kDa heat shock protein Hsp {ECO:0000313|EMBL:AGX41317.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicu
NECEvent2014_6_3_scaffold_29_11
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7837..8025)
-----------------
DNA (189bp)
protein (63aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX42622.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM
NECEvent2014_6_3_scaffold_29_12
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8157..10079)
-----------------
DNA (1923bp)
protein (641aa)
Uncharacterized protein {ECO:0000313|EMBL:CDB15697.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
hypothetical protein
NECEvent2014_6_3_scaffold_29_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10279..10620)
-----------------
DNA (342bp)
protein (114aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG85333.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM1
NECEvent2014_6_3_scaffold_29_14
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10693..11592)
-----------------
DNA (900bp)
protein (300aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM68161.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
NECEvent2014_6_3_scaffold_29_15
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11761..12897)
-----------------
DNA (1137bp)
protein (379aa)
NAD/NADP octopine/nopaline dehydrogenase {ECO:0000313|EMBL:EKY27402.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatu
hypothetical protein
NECEvent2014_6_3_scaffold_29_16
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12998..14794)
-----------------
DNA (1797bp)
protein (599aa)
pepF; oligoendopeptidase F (EC:3.4.24.-)
Oligoendopeptidase F {ECO:0000313|EMBL:EKY29451.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
NECEvent2014_6_3_scaffold_29_17
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14840..15238)
-----------------
DNA (399bp)
protein (133aa)
Uncharacterized protein {ECO:0000313|EMBL:CDG01217.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
hypothetical protein
NECEvent2014_6_3_scaffold_29_18
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15457..15852
-----------------
DNA (396bp)
protein (132aa)
Uncharacterized protein {ECO:0000313|EMBL:EHJ01544.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
hypothetical protein
NECEvent2014_6_3_scaffold_29_19
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15977..16651
-----------------
DNA (675bp)
protein (225aa)
zinc import ATP-binding protein ZnuC (EC:3.6.3.-)
Putative metal ion ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EES48923.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clo
NECEvent2014_6_3_scaffold_29_20
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16654..17445
-----------------
DNA (792bp)
protein (264aa)
high-affinity Zinc uptake system membrane protein ZnuB
Putative ABC transporter, permease protein {ECO:0000313|EMBL:CDH89695.1}; Putative metal ion ABC transporter, permease protein {ECO:0000313|EMBL:ACD24335.1}; TaxID=935198 species="Bacteria; Firmicutes
NECEvent2014_6_3_scaffold_29_21
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17528..17959
-----------------
DNA (432bp)
protein (144aa)
Uncharacterized protein {ECO:0000313|EMBL:EOR27772.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
NECEvent2014_6_3_scaffold_29_22
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18086..18499)
-----------------
DNA (414bp)
protein (138aa)
Fur family transcriptional regulator
Transcriptional regulator, Fur family {ECO:0000313|EMBL:EES49857.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum
NECEvent2014_6_3_scaffold_29_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18569..19120)
-----------------
DNA (552bp)
protein (184aa)
Membrane protein {ECO:0000313|EMBL:EEP55396.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL526
hypothetical protein
NECEvent2014_6_3_scaffold_29_24
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19314..20531
-----------------
DNA (1218bp)
protein (406aa)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|
phosphofructokinase family protein
NECEvent2014_6_3_scaffold_29_25
unknown

Not on your lists

comp(20560..20847)
-----------------
DNA (288bp)
protein (96aa)

This feature has no annotations

NECEvent2014_6_3_scaffold_29_26
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20875..22164)
-----------------
DNA (1290bp)
protein (430aa)
csd1; cysteine desulfurase Csd (EC:2.8.1.7)
Cysteine desulfurase Csd {ECO:0000313|EMBL:AGX44968.1}; EC=2.8.1.7 {ECO:0000313|EMBL:AGX44968.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;
NECEvent2014_6_3_scaffold_29_27
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22308..23456
-----------------
DNA (1149bp)
protein (383aa)
Uncharacterized protein {ECO:0000313|EMBL:EOR24786.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
NECEvent2014_6_3_scaffold_29_28
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23467..24090
-----------------
DNA (624bp)
protein (208aa)
Uncharacterized protein {ECO:0000313|EMBL:CDG01208.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
hypothetical protein
NECEvent2014_6_3_scaffold_29_29
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24127..26733)
-----------------
DNA (2607bp)
protein (869aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY83686.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.
NECEvent2014_6_3_scaffold_29_30
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26747..28846)
-----------------
DNA (2100bp)
protein (700aa)
Antibiotic ABC transporter permease {ECO:0000313|EMBL:KJU72223.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
MMPL family protein
Displaying items 1-30 of 93 in total

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