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NECEvent2014_6_3_scaffold_13_18

Organism: NECEvent2014_6_3_Clostridium_paraputrificum_29_53

near complete RP 49 / 55 MC: 1 BSCG 51 / 51 ASCG 16 / 38 MC: 1
Location: comp(16879..19710)

Top 3 Functional Annotations

Value Algorithm Source
levR3; transcriptional regulatory protein LevR (EC:2.7.1.-) similarity KEGG
DB: KEGG
  • Identity: 35.6
  • Coverage: 970.0
  • Bit_score: 540
  • Evalue 9.10e-151
PTS system transcriptional activator {ECO:0000313|EMBL:EHI99227.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VII similarity UNIPROT
DB: UniProtKB
  • Identity: 49.8
  • Coverage: 943.0
  • Bit_score: 904
  • Evalue 1.20e-259

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Taxonomy

Clostridium sp. DL-VIII → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 2832
GTGTTAAGAATTGATGTCATAAAAAATCATATTGAGGCTTTTTGCGAAAACGTTACTATTAATGATATAAAAGAAAATCCAACTTTAGGAATTTCCTCTTTAGATATAGTTGAAAAACTTAGTATACTTAGAAATAATGCCTCTTCAGATTTGAATAAACTTTATAAAGATGGTTTACTTATAAAAATCAAAGGAAAACCAACTAAGTATTTTGACAGAGAGCGCTTTGAAAATATATTTCAAATCCTTTTAGAAGACCAATGTCTAGAATGCTCTTCTTTAGCAGATTTAGTTCCAATTTTAGATTATTCAAATGAGAAAGAAGTTAGTAATACTAATAACTTAGATCCTTTTAACAAATTAATAGGTTCAAATCATAGTTTAGCAGGTATAGTAAAGTTAGGTAAATCATCAATACTTTATCCTAATGGACTTCATACTATACTTCTTGGAGAGTCTGGTGTTGGTAAAAGTCTATTTGCCGAAATCATGTATGAGTATGGTGTACAAAATAATGTGTTTAGCAAAAACTCCTCTTTTGTGGTATTTAACTGTGCCGACTATGCTAATAATCCAAATCTATTAGTTGCTCAATTATTTGGTACTGTTAAAGGAGCATATACTGGCGCAGATACTGACAAAAAAGGGTTAATAGAAGAAGCTGATGGTGGGGTTTTATTTTTAGATGAAATCCATAGACTTCCTCCAGAGGGGCAAGAAATGCTCTTCTTATATATTGATAAACAAAAATTTAGAAGACTTGGAGAAACTTCCTCTGAGAGAACTGCTAAGGTTCTAATAATAGCAGCTACGACAGAAAATCCTAACTCTATGTTGCTTACTACATTCCTAAGGAGAATACCATCATCAATAAGAATTCCTAGTCTTAAAGAGAGAACCTTAAGTGAAAAACTAATGCTAGTTAACAATTTATATAGTGCTGAGTCTAAAAAAATAAATATGCCTATACATGTTGATAAAAACTGTTTATCAGACTTAATGCTATATAATCCTCATGGAAATATCGGTCAACTAGCAAGTGACATTCAACTATCCGTTGCTAGATCATATTTAGATAGTAGACTCAACAACTTAGATAAAGTTCATATAACCAAAGATTCATTGCCACTTTATACTAACAACACTCTATCTAACATAGAAATCTCAACTAGACAAAAAGTTGAACTTCTTTTAGATAAAAATGAATATAAATTTTCACCTGGAAGCCAAATCTTTAAAACGGCTCCCACACCAACATATGACTTTGTAAAATTCTATAATAATCAATTAAACATCTTAGGAAAGGATAATGTAGATATTAAGAAAACTTTTTCTGATTATACCCAACTAATTGCAAAAAATCTTACATTACAAAAAATGTATCCAGATTTTTTAGATGATGAAACATCAGAAATAATATCCACTCTATCTGATATTTTATATGATGATTTAAATCTTGTAATTGATAGAAGTTCATATGCAGCACTTGCTTTATATCTTAAAAATTTAAAAGACTACAATAGTGATACTAAACAAATTTCTAAAACTACAGACTTATTGGATATACCTTTAGAAATTCAATCAGTTTGCAAAAAGATTGTTAAAACTCTTGAAGTTAAATTTAATATATACTGTCCAACTGAAGAACTTAACAATCTAATGATTATAATAGATTCCTTAAAATCTAAAGAAAATTTTGATTCTGTAGGTATTATGATAGCCGCCCATGGAGACTCTTTAGCTAGTAATATAGCAGATGTTGCTAACGACTTACTTAGCATTAATTTTGCTTTAGCTATTGATATGCCTCTTACTGAGGATGCAAGTAAGATATTACCTCTATTCTTAGAAAAATTAAAACCAGGAACCTTTAAAAGAGGATTAATTTTATTTGCTGATATGGGGTCACTAACTACTCTTGATGAAGTCATAAAAGAGAAAACTGGAATAAATATTGTAACTGTTAATTCAACTAATATATTATTAGTTATCGAAGCTATTCGGAAGTCCATATTTTTAAAGAGTGATATGGATGATATTCTTCATGATTTAATAGGAATGAATAACAAACTTTCTTATAGCTTTAATAAAAAAATAGAGAACCACCTTTCAATAAATAAAAAGAGGTTAATATATACTGTTTGTAATTCAGGTGAAGGAGTGGCAAACTACCTTCATTACAACTTAAAGAATATATTAAAAGATAATAATATTTATGATATAGAAATAATTCCTTTAAATTTAGAAAGTAAGACTCAACTTAGAGACATAATACATCGAACATCTATTGATAAGAAAACAATAGCTATTGTAGGTAGTATAAACCCAGATACAAACGATATTCCATTTATATCTTTGGAGGATATCGTATTGCATAATGGTGTTAATAAACTTCTTTCTTTAATAGGAGTACAAAATAAAAATACTGAAAATAAAATAGTTACAACCTTAACAAAAGATATAGCAATAAATATTACTTGTGATGCTGTAGACAAGTATTTAACTATATTCTCAGCATACAAGATAAAACCACTTGTCTTTAACTTTATAAATGCTATCGAAAAGAATTTAGAAATTGTATTAACAAACTCTAGCATAACAAAAATCTTTATTCATTTATCCTGTGCTATAGAAAGAATTTTTCTTAAAGACTTTATTTTAACCCCTCAAGAAGAAATGTCTAGCTATATTATAAATAATGAAAAGTATGTAAACGTAACAAACAGGGCGCTAGAAGAATTAACTGATAACTTGAATATAACAATCCCAACAAATGAACTTTACTATATATGTGAAATAGTAAAAGATGCTTATAAACAAGCTACAACATAA
PROTEIN sequence
Length: 944
VLRIDVIKNHIEAFCENVTINDIKENPTLGISSLDIVEKLSILRNNASSDLNKLYKDGLLIKIKGKPTKYFDRERFENIFQILLEDQCLECSSLADLVPILDYSNEKEVSNTNNLDPFNKLIGSNHSLAGIVKLGKSSILYPNGLHTILLGESGVGKSLFAEIMYEYGVQNNVFSKNSSFVVFNCADYANNPNLLVAQLFGTVKGAYTGADTDKKGLIEEADGGVLFLDEIHRLPPEGQEMLFLYIDKQKFRRLGETSSERTAKVLIIAATTENPNSMLLTTFLRRIPSSIRIPSLKERTLSEKLMLVNNLYSAESKKINMPIHVDKNCLSDLMLYNPHGNIGQLASDIQLSVARSYLDSRLNNLDKVHITKDSLPLYTNNTLSNIEISTRQKVELLLDKNEYKFSPGSQIFKTAPTPTYDFVKFYNNQLNILGKDNVDIKKTFSDYTQLIAKNLTLQKMYPDFLDDETSEIISTLSDILYDDLNLVIDRSSYAALALYLKNLKDYNSDTKQISKTTDLLDIPLEIQSVCKKIVKTLEVKFNIYCPTEELNNLMIIIDSLKSKENFDSVGIMIAAHGDSLASNIADVANDLLSINFALAIDMPLTEDASKILPLFLEKLKPGTFKRGLILFADMGSLTTLDEVIKEKTGINIVTVNSTNILLVIEAIRKSIFLKSDMDDILHDLIGMNNKLSYSFNKKIENHLSINKKRLIYTVCNSGEGVANYLHYNLKNILKDNNIYDIEIIPLNLESKTQLRDIIHRTSIDKKTIAIVGSINPDTNDIPFISLEDIVLHNGVNKLLSLIGVQNKNTENKIVTTLTKDIAINITCDAVDKYLTIFSAYKIKPLVFNFINAIEKNLEIVLTNSSITKIFIHLSCAIERIFLKDFILTPQEEMSSYIINNEKYVNVTNRALEELTDNLNITIPTNELYYICEIVKDAYKQATT*